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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CGA1   cytokinin-responsive gata factor 1 
 ath-r.7   CGA1   cytokinin-responsive gata factor 1 
 ath-m.9   CGA1   cytokinin-responsive gata factor 1 
 ath-e.2   CGA1   cytokinin-responsive gata factor 1 
 ath-m.4.bio   CGA1   cytokinin-responsive gata factor 1 
 ath-m.4.hor   CGA1   cytokinin-responsive gata factor 1 
 ath-m.4.lig   CGA1   cytokinin-responsive gata factor 1 
 ath-m.4.str   CGA1   cytokinin-responsive gata factor 1 
 ath-m.4.tis   CGA1   cytokinin-responsive gata factor 1 
 ath-u.5   GNC   GATA type zinc finger transcription factor family protein 
 bra-r.6   103865903   putative GATA transcription factor 22 
 bra-r.6   103861615   putative GATA transcription factor 22 
 bra-r.6   103856792   GATA transcription factor 21 
 bna-r.1   106444389   putative GATA transcription factor 22 
 bna-r.1   106442019   GATA transcription factor 21-like 
 bna-r.1   106440876   putative GATA transcription factor 22 
 ghi-r.1   107887250   GATA transcription factor 21 
 ghi-r.1   107901115   GATA transcription factor 21 
 ghi-r.1   107907143   GATA transcription factor 21 
 gma-u.5   100780875   putative GATA transcription factor 22 
 gma-u.5   100792098   GATA transcription factor 21 
 gma-u.5   100810090   GATA transcription factor 21 
 vvi-u.5   100261004   GATA transcription factor 21 
 mtr-u.5   25494244   putative GATA transcription factor 22 
 sly-u.5   101262132   GATA transcription factor 16 
 sot-r.1   102595859   GATA transcription factor 21 

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Top 50 coexpressed genes to CGA1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CGA1 (ath-u.5 coexpression data)

CoexMap"828721"


athCGA1 | Entrez gene ID : 828721      
Species ath bra bna ghi gma vvi mtr sly sot tae zma nta bdi osa ppo cit sbi hvu cre
Paralog 10 3 3 3 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0010151 [list] [network] chloroplast elongation  (2 genes)  IMP  
GO:0043610 [list] [network] regulation of carbohydrate utilization  (2 genes)  IMP  
GO:1902326 [list] [network] positive regulation of chlorophyll biosynthetic process  (11 genes)  IMP  
GO:0009938 [list] [network] negative regulation of gibberellic acid mediated signaling pathway  (15 genes)  IMP  
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (26 genes)  IMP  
GO:0080050 [list] [network] regulation of seed development  (26 genes)  IMP  
GO:0010187 [list] [network] negative regulation of seed germination  (29 genes)  IEP  
GO:0010167 [list] [network] response to nitrate  (31 genes)  TAS  
GO:0009740 [list] [network] gibberellic acid mediated signaling pathway  (41 genes)  IEP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (66 genes)  IMP  
GO:0010114 [list] [network] response to red light  (73 genes)  IEP  
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0010029 [list] [network] regulation of seed germination  (105 genes)  IMP  
GO:0007623 [list] [network] circadian rhythm  (124 genes)  IEP  
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IEP  
GO:0009739 [list] [network] response to gibberellin  (125 genes)  IEP  
GO:0090693 [list] [network] plant organ senescence  (136 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (2062 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IMP ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_194345.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_194345.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_194345.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CGA1
ath-r.7
for
CGA1
ath-m.9
for
CGA1
ath-e.2
for
CGA1
ath-m.4.bio
for
CGA1
ath-m.4.hor
for
CGA1
ath-m.4.lig
for
CGA1
ath-m.4.str
for
CGA1
ath-m.4.tis
for
CGA1
ath-u.5
for
GNC
bra-r.6
for
103865903
bra-r.6
for
103861615
bra-r.6
for
103856792
bna-r.1
for
106444389
bna-r.1
for
106442019
bna-r.1
for
106440876
ghi-r.1
for
107887250
ghi-r.1
for
107901115
ghi-r.1
for
107907143
gma-u.5
for
100780875
gma-u.5
for
100792098
gma-u.5
for
100810090
vvi-u.5
for
100261004
mtr-u.5
for
25494244
sly-u.5
for
101262132
sot-r.1
for
102595859


Ortholog ID: 8557
Species ath ath bra bra bra bna bna bna ghi ghi ghi gma gma gma vvi mtr sly sot
Symbol CGA1 GNC LOC103865903 LOC103861615 LOC103851805 LOC106442019 LOC106407478 LOC106402315 LOC107887250 LOC107907143 LOC107937710 LOC100780875 LOC100792098 LOC100810090 LOC100261004 LOC25494244 LOC101262132 LOC102595859
Function* cytokinin-responsive gata factor 1 GATA type zinc finger transcription factor family protein putative GATA transcription factor 22 putative GATA transcription factor 22 GATA transcription factor 21 GATA transcription factor 21-like putative GATA transcription factor 22 putative GATA transcription factor 22 GATA transcription factor 21 GATA transcription factor 21 GATA transcription factor 21 putative GATA transcription factor 22 GATA transcription factor 21 GATA transcription factor 21 GATA transcription factor 21 putative GATA transcription factor 22 GATA transcription factor 16 GATA transcription factor 21
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi04075 Plant hormone signal transduction 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00710 Carbon fixation by Calvin cycle 6
ghi01200 Carbon metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828721 835788 103865903 103861615 103851805 106442019 106407478 106402315 107887250 107907143 107937710 100780875 100792098 100810090 100261004 25494244 101262132 102595859
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