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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SDG4   SET domain group 4 
 ath-r.7   SDG4   SET domain group 4 
 ath-m.9   SDG4   SET domain group 4 
 ath-e.2   SDG4   SET domain group 4 
 ath-m.4.bio   SDG4   SET domain group 4 
 ath-m.4.hor   SDG4   SET domain group 4 
 ath-m.4.lig   SDG4   SET domain group 4 
 ath-m.4.str   SDG4   SET domain group 4 
 ath-m.4.tis   SDG4   SET domain group 4 
 gma-u.5   100791481   histone-lysine N-methyltransferase ASHR3 
 vvi-u.5   100241513   histone-lysine N-methyltransferase ASHR3 
 mtr-u.5   25480139   histone-lysine N-methyltransferase ASHR3 
 sly-u.5   101249099   uncharacterized LOC101249099 
 osa-u.5   4329956   histone-lysine N-methyltransferase ASHR3-like 
 zma-u.5   100194312   putative SET-domain containing protein family 

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Top 50 coexpressed genes to SDG4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SDG4 (ath-u.5 coexpression data)

CoexMap"829210"


athSDG4 | Entrez gene ID : 829210      
Species ath gma vvi mtr sly osa zma tae hvu ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 9 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0042054 [list] [network] histone methyltransferase activity  (31 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_567859.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  chlo 1,  plas 1  (predict for NP_567859.1)
Subcellular
localization
TargetP
scret 5  (predict for NP_567859.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SDG4

.
ath-r.7
for
SDG4

.
ath-m.9
for
SDG4

.
ath-e.2
for
SDG4

.
ath-m.4.bio
for
SDG4

.
ath-m.4.hor
for
SDG4

.
ath-m.4.lig
for
SDG4

.
ath-m.4.str
for
SDG4

.
ath-m.4.tis
for
SDG4

.
gma-u.5
for
100791481

.
vvi-u.5
for
100241513

.
mtr-u.5
for
25480139

.
sly-u.5
for
101249099

.
osa-u.5
for
4329956

.
zma-u.5
for
100194312

.


Ortholog ID: 10893
Species ath gma sly osa zma bra vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol SDG4 LOC100791481 LOC101249099 LOC4329956 LOC100194312 LOC103834651 LOC100241513 LOC25480139 LOC123144789 LOC123127677 LOC123401143 LOC107938600 LOC107937178 LOC106424147 LOC106378463 LOC8072451 LOC102597385 LOC102626685 LOC100834519 LOC107791163 LOC107831893
Function* SET domain group 4 histone-lysine N-methyltransferase ASHR3 uncharacterized LOC101249099 histone-lysine N-methyltransferase ASHR3-like putative SET-domain containing protein family histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3-like histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 uncharacterized LOC102597385 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3 histone-lysine N-methyltransferase ASHR3-like histone-lysine N-methyltransferase ASHR3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03030 DNA replication 3
ath00270 Cysteine and methionine metabolism 2
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 3
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 7
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 3
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 5
mtr00240 Pyrimidine metabolism 5
mtr00480 Glutathione metabolism 5
mtr01232 Nucleotide metabolism 5
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 6
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi04814 Motor proteins 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi04814 Motor proteins 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna00270 Cysteine and methionine metabolism 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03420 Nucleotide excision repair 4
bna03430 Mismatch repair 4
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot00270 Cysteine and methionine metabolism 2
sot03420 Nucleotide excision repair 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
nta03430 Mismatch repair 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829210 100791481 101249099 4329956 100194312 103834651 100241513 25480139 123144789 123127677 123401143 107938600 107937178 106424147 106378463 8072451 102597385 102626685 100834519 107791163 107831893
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