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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G31890   ARM repeat superfamily protein 
 ath-r.7   AT4G31890   ARM repeat superfamily protein 
 ath-m.9   AT4G31890   ARM repeat superfamily protein 
 ath-e.2   AT4G31890   ARM repeat superfamily protein 
 ath-m.4.bio   AT4G31890   ARM repeat superfamily protein 
 ath-m.4.hor   AT4G31890   ARM repeat superfamily protein 
 ath-m.4.lig   AT4G31890   ARM repeat superfamily protein 
 ath-m.4.str   AT4G31890   ARM repeat superfamily protein 
 ath-m.4.tis   AT4G31890   ARM repeat superfamily protein 
 gma-u.5   100788575   U-box domain-containing protein 7 
 gma-u.5   100808483   U-box domain-containing protein 6 
 gma-u.5   100818576   U-box domain-containing protein 12 
 vvi-u.5   100266281   U-box domain-containing protein 7 
 ppo-u.5   7468682   U-box domain-containing protein 12 
 mtr-u.5   11435426   U-box domain-containing protein 15 
 mtr-u.5   11431919   U-box domain-containing protein 7 
 sly-u.5   101264539   U-box domain-containing protein 4-like 
 osa-u.5   4347067   U-box domain-containing protein 12-like 
 zma-u.5   100194379   uncharacterized LOC100194379 

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Top 50 coexpressed genes to AT4G31890 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G31890 (ath-u.5 coexpression data)

CoexMap"829319"


athAT4G31890 | Entrez gene ID : 829319      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 3 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_001190883.1 [sequence] [blastp]
NP_001329198.1 [sequence] [blastp]
NP_194917.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_001190883.1)
chlo 8,  mito 2  (predict for NP_001329198.1)
chlo 8,  mito 2  (predict for NP_194917.1)
Subcellular
localization
TargetP
chlo 8,  mito 3  (predict for NP_001190883.1)
chlo 8,  mito 3  (predict for NP_001329198.1)
chlo 8,  mito 3  (predict for NP_194917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G31890
ath-r.7
for
AT4G31890
ath-m.9
for
AT4G31890
ath-e.2
for
AT4G31890
ath-m.4.bio
for
AT4G31890
ath-m.4.hor
for
AT4G31890
ath-m.4.lig
for
AT4G31890
ath-m.4.str
for
AT4G31890
ath-m.4.tis
for
AT4G31890
gma-u.5
for
100788575
gma-u.5
for
100808483
gma-u.5
for
100818576
vvi-u.5
for
100266281
ppo-u.5
for
7468682
mtr-u.5
for
11435426
mtr-u.5
for
11431919
sly-u.5
for
101264539
osa-u.5
for
4347067
zma-u.5
for
100194379


Ortholog ID: 6499
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol AT4G31890 LOC103842209 LOC103851456 LOC106389771 LOC106354750 LOC107906842 LOC107961683 LOC102623267 LOC100808483 LOC100796229 LOC100266281 LOC7468682 LOC11435426 LOC11431919 LOC101264539 LOC102587079 LOC107809034 LOC107828322 LOC4347067 LOC100194379 LOC123103879 LOC123112104 LOC123395470 LOC8068361 LOC100839452
Function* ARM repeat superfamily protein U-box domain-containing protein 7 U-box domain-containing protein 14 U-box domain-containing protein 7-like U-box domain-containing protein 14 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 12-like U-box domain-containing protein 6 U-box domain-containing protein 4 U-box domain-containing protein 7 U-box domain-containing protein 12 U-box domain-containing protein 15 U-box domain-containing protein 7 U-box domain-containing protein 4-like U-box domain-containing protein 12-like U-box domain-containing protein 45 U-box domain-containing protein 45-like U-box domain-containing protein 12-like uncharacterized LOC100194379 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 7 U-box domain-containing protein 13 U-box domain-containing protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 2
gma00920 Sulfur metabolism 2
gma04122 Sulfur relay system 2
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae00460 Cyanoamino acid metabolism 3
tae00500 Starch and sucrose metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829319 103842209 103851456 106389771 106354750 107906842 107961683 102623267 100808483 100796229 100266281 7468682 11435426 11431919 101264539 102587079 107809034 107828322 4347067 100194379 123103879 123112104 123395470 8068361 100839452
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