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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SSN2   zinc finger SWIM domain protein 
 ath-m.4.bio   SSN2   zinc finger SWIM domain protein 
 ath-m.4.hor   SSN2   zinc finger SWIM domain protein 
 ath-m.4.lig   SSN2   zinc finger SWIM domain protein 
 ath-m.4.str   SSN2   zinc finger SWIM domain protein 
 ath-m.4.tis   SSN2   zinc finger SWIM domain protein 
 bra-r.6   103843698   zinc finger SWIM domain-containing protein 7 
 ghi-r.1   107886962   zinc finger SWIM domain-containing protein 7 
 ghi-r.1   107908858   zinc finger SWIM domain-containing protein 7 
 gma-u.5   100792213   zinc finger SWIM domain-containing protein 7 
 vvi-u.5   100259392   uncharacterized LOC100259392 
 ppo-u.5   7478724   uncharacterized LOC7478724 
 mtr-u.5   25481004   zinc finger SWIM domain-containing protein 7 
 mtr-u.5   11408530   zinc finger SWIM domain-containing protein 7 
 sly-u.5   101248165   uncharacterized LOC101248165 
 sot-r.1   102586723   zinc finger SWIM domain-containing protein 7 
 nta-r.1   107818204   uncharacterized LOC107818204 
 nta-r.1   107784698   uncharacterized LOC107784698 
 zma-u.5   100277790   uncharacterized LOC100277790 
 cre-r.1   CHLRE_16g668000v5   uncharacterized protein 

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Top 50 coexpressed genes to SSN2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SSN2 (ath-m.9 coexpression data)

CoexMap"829537"


athSSN2 | Entrez gene ID : 829537      
Species ath bra ghi gma vvi ppo mtr sly sot nta zma cre hvu bdi osa tae bna sbi cit
Paralog 6 1 2 1 1 1 2 1 1 2 1 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (43 genes)  IMP  
GO:0042742 [list] [network] defense response to bacterium  (363 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001154286.1 [sequence] [blastp]
NP_567942.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3  (predict for NP_001154286.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_567942.1)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_001154286.1)
other 6,  scret 3  (predict for NP_567942.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SSN2
ath-m.4.bio
for
SSN2
ath-m.4.hor
for
SSN2
ath-m.4.lig
for
SSN2
ath-m.4.str
for
SSN2
ath-m.4.tis
for
SSN2
bra-r.6
for
103843698
ghi-r.1
for
107886962
ghi-r.1
for
107908858
gma-u.5
for
100792213
vvi-u.5
for
100259392
ppo-u.5
for
7478724
mtr-u.5
for
25481004
mtr-u.5
for
11408530
sly-u.5
for
101248165
sot-r.1
for
102586723
nta-r.1
for
107818204
nta-r.1
for
107784698
zma-u.5
for
100277790
cre-r.1
for
CHLRE_16g668000v5


Ortholog ID: 9622
Species bra ghi ghi gma vvi ppo mtr mtr sly sot nta nta zma cre
Symbol LOC103843698 LOC107886962 LOC107908858 LOC100792213 LOC100259392 LOC7478724 LOC25481004 LOC11408530 LOC101248165 LOC102586723 LOC107818204 LOC107784698 LOC100277790 CHLRE_16g668000v5
Function* zinc finger SWIM domain-containing protein 7 zinc finger SWIM domain-containing protein 7 zinc finger SWIM domain-containing protein 7 zinc finger SWIM domain-containing protein 7 uncharacterized LOC100259392 uncharacterized LOC7478724 zinc finger SWIM domain-containing protein 7 zinc finger SWIM domain-containing protein 7 uncharacterized LOC101248165 zinc finger SWIM domain-containing protein 7 uncharacterized LOC107818204 uncharacterized LOC107784698 uncharacterized LOC100277790 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103843698 107886962 107908858 100792213 100259392 7478724 25481004 11408530 101248165 102586723 107818204 107784698 100277790 5717713
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