ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-m.9	AT4G34880	Amidase family protein
ath-m.4.bio	AT4G34880	Amidase family protein
ath-m.4.hor	AT4G34880	Amidase family protein
ath-m.4.lig	AT4G34880	Amidase family protein
ath-m.4.str	AT4G34880	Amidase family protein
ath-m.4.tis	AT4G34880	Amidase family protein
gma-u.5	100781615	putative amidase C869.01-like
gma-u.5	100807918	probable amidase At4g34880
vvi-u.5	100265841	probable amidase At4g34880
vvi-u.5	100260628	probable amidase At4g34880
ppo-u.5	7472144	probable amidase At4g34880
mtr-u.5	25492802	probable amidase At4g34880
mtr-u.5	11427108	probable amidase At4g34880
mtr-u.5	25492807	probable amidase At4g34880
sly-u.5	101255659	probable amidase At4g34880
sly-u.5	101257218	probable amidase At4g34880
sly-u.5	109119323	probable amidase At4g34880
osa-u.5	4335106	probable amidase At4g34880
zma-u.5	100283862	amidase

Annotation

functional annotation

KEGG

ath00330 [list] [network] Arginine and proline metabolism (54 genes)

ath00360 [list] [network] Phenylalanine metabolism (33 genes)

ath00380 [list] [network] Tryptophan metabolism (64 genes)

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(5014 genes)

ISM

GO MF

GO:0043864 [list] [network] indoleacetamide hydrolase activity	(2 genes)	IEA
GO:0004040 [list] [network] amidase activity	(8 genes)	IEA

Protein

NP_001329257.1 [sequence] [blastp]
NP_195214.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, vacu 1, E.R. 1, E.R._vacu 1	(predict for NP_001329257.1)
chlo 6, vacu 1, E.R. 1, E.R._vacu 1	(predict for NP_195214.1)

Subcellular
localization
TargetP

scret 9	(predict for NP_001329257.1)
scret 9	(predict for NP_195214.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT4G34880	ath-m.4.bio for AT4G34880	ath-m.4.hor for AT4G34880	ath-m.4.lig for AT4G34880	ath-m.4.str for AT4G34880	ath-m.4.tis for AT4G34880	gma-u.5 for 100781615	gma-u.5 for 100807918	vvi-u.5 for 100265841	vvi-u.5 for 100260628	ppo-u.5 for 7472144	mtr-u.5 for 25492802	mtr-u.5 for 11427108	mtr-u.5 for 25492807	sly-u.5 for 101255659	sly-u.5 for 101257218	sly-u.5 for 109119323	osa-u.5 for 4335106	zma-u.5 for 100283862

Ortholog

Ortholog ID: 1284

Species

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

tae

hvu

sbi

bdi

Symbol

Function^*

probable amidase At4g34880

putative amidase C869.01-like

probable amidase At4g34880

putative amidase C869.01

putative amidase At4g34880

probable amidase At4g34880

putative amidase C869.01

probable amidase At4g34880

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
bna01230	Biosynthesis of amino acids	5
bna04016	MAPK signaling pathway - plant	4
bna00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	6
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
bna01230	Biosynthesis of amino acids	5
bna04016	MAPK signaling pathway - plant	4
bna00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00330	Arginine and proline metabolism	2
cit00360	Phenylalanine metabolism	2
cit00380	Tryptophan metabolism	2
cit00904	Diterpenoid biosynthesis	2
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00330	Arginine and proline metabolism	2
cit00360	Phenylalanine metabolism	2
cit00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00511	Other glycan degradation	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00330	Arginine and proline metabolism	2
vvi00360	Phenylalanine metabolism	2
vvi00380	Tryptophan metabolism	2
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00330	Arginine and proline metabolism	2
ppo00360	Phenylalanine metabolism	2
ppo00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	7
mtr00360	Phenylalanine metabolism	7
mtr00380	Tryptophan metabolism	7
mtr00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	7
mtr00360	Phenylalanine metabolism	7
mtr00380	Tryptophan metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	4
sot00460	Cyanoamino acid metabolism	2
sot00500	Starch and sucrose metabolism	2
sot00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00592	alpha-Linolenic acid metabolism	7
nta00330	Arginine and proline metabolism	2
nta00360	Phenylalanine metabolism	2
nta00380	Tryptophan metabolism	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta04626	Plant-pathogen interaction	2
nta04141	Protein processing in endoplasmic reticulum	2
nta00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	5
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa04075	Plant hormone signal transduction	2
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	5
tae00360	Phenylalanine metabolism	5
tae00380	Tryptophan metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00941	Flavonoid biosynthesis	6
tae04712	Circadian rhythm - plant	6
tae00330	Arginine and proline metabolism	5
tae00360	Phenylalanine metabolism	5
tae00380	Tryptophan metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2
hvu00010	Glycolysis / Gluconeogenesis	2
hvu00020	Citrate cycle (TCA cycle)	2
hvu00620	Pyruvate metabolism	2
hvu00785	Lipoic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	3
sbi04145	Phagosome	3
sbi00330	Arginine and proline metabolism	3
sbi00360	Phenylalanine metabolism	3
sbi00380	Tryptophan metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00330	Arginine and proline metabolism	3
sbi00360	Phenylalanine metabolism	3
sbi00380	Tryptophan metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	7
bdi01230	Biosynthesis of amino acids	7
bdi00330	Arginine and proline metabolism	2
bdi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00510	N-Glycan biosynthesis	4
bdi00513	Various types of N-glycan biosynthesis	4
bdi04141	Protein processing in endoplasmic reticulum	4
bdi04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

103853805

106400862

106416484

107921334

102625290

112495464

100781615

100250374

7472143

11427108

25492802

101257218

109119323

102592174

107781388

107814976

4335106

4335108

123040026

123040032

123451684

123424857

8080676

8080677

100837646

100835116

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G34880 (ath-m.9 coexpression data)

Top 50 enrichment test to AT4G34880 (ath-m.9 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	2	2	1	3	3	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G34880 (ath-m.9 coexpression data)

Top 50 enrichment test to AT4G34880 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**