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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   P4H5   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-u.5   AT5G66060   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 ath-u.5   AT1G20270   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 
 gma-u.5   100527885   probable prolyl 4-hydroxylase 10 
 gma-u.5   100806046   prolyl 4-hydroxylase subunit alpha-1-like 
 gma-u.5   100818586   probable prolyl 4-hydroxylase 3 
 vvi-u.5   100252286   probable prolyl 4-hydroxylase 10 
 vvi-u.5   100252283   probable prolyl 4-hydroxylase 3 
 ppo-u.5   18096083   probable prolyl 4-hydroxylase 3 
 ppo-u.5   7485620   probable prolyl 4-hydroxylase 3 
 ppo-u.5   18101055   probable prolyl 4-hydroxylase 10 
 mtr-u.5   11439917   probable prolyl 4-hydroxylase 3 
 mtr-u.5   11420577   probable prolyl 4-hydroxylase 10 
 sly-u.5   101267095   probable prolyl 4-hydroxylase 10 
 sly-u.5   101246711   probable prolyl 4-hydroxylase 3 
 sly-u.5   101245118   probable prolyl 4-hydroxylase 10 
 osa-u.5   4331220   probable prolyl 4-hydroxylase 3 
 osa-u.5   4349012   probable prolyl 4-hydroxylase 3 
 zma-u.5   100193348   prolyl 4-hydroxylase 1 
 zma-u.5   100303994   prolyl 4-hydroxylase alpha-2 subunit 

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Top 50 coexpressed genes to P4H5 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to P4H5 (ath-u.5 coexpression data)

CoexMap"829735"


athAT4G35810 | Entrez gene ID : 829735      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 3 2 3 2 3 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00330 [list] [network] Arginine and proline metabolism (54 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001320148.1 [sequence] [blastp]
NP_195306.2 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  cyto 2,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001320148.1)
mito 3,  cyto 2,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_195306.2)
Subcellular
localization
TargetP
mito 5  (predict for NP_001320148.1)
mito 5  (predict for NP_195306.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
P4H5
ath-u.5
for
AT5G66060
ath-u.5
for
AT1G20270
gma-u.5
for
100527885
gma-u.5
for
100806046
gma-u.5
for
100818586
vvi-u.5
for
100252286
vvi-u.5
for
100252283
ppo-u.5
for
18096083
ppo-u.5
for
7485620
ppo-u.5
for
18101055
mtr-u.5
for
11439917
mtr-u.5
for
11420577
sly-u.5
for
101267095
sly-u.5
for
101246711
sly-u.5
for
101245118
osa-u.5
for
4331220
osa-u.5
for
4349012
zma-u.5
for
100193348
zma-u.5
for
100303994


Ortholog ID: 1835
Species ath bra bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol AT5G66060 LOC103845927 LOC103874104 LOC106440743 LOC106347086 LOC107905546 LOC107937571 LOC102615950 LOC102628780 LOC100527885 LOC100818586 LOC100252283 LOC100252286 LOC18101055 LOC7485620 LOC11439917 LOC11420577 LOC101267095 LOC101245118 LOC102580816 LOC102579923 LOC107769895 LOC107798883 LOC4349012 LOC4331220 LOC100193348 LOC100303994 LOC123129127 LOC123146290 LOC123406152 LOC123432846 LOC8065808 LOC8055347 LOC100835342 LOC100835020
Function* 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein prolyl 4-hydroxylase 5 prolyl 4-hydroxylase 5 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 10 putative prolyl 4-hydroxylase 10 putative prolyl 4-hydroxylase 10 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 prolyl 4-hydroxylase 1 prolyl 4-hydroxylase alpha-2 subunit probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3 probable prolyl 4-hydroxylase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00330 Arginine and proline metabolism 3
bra04626 Plant-pathogen interaction 2
bra00640 Propanoate metabolism 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00330 Arginine and proline metabolism 3
bra00020 Citrate cycle (TCA cycle) 3
bra00640 Propanoate metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi00330 Arginine and proline metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 7
ghi00330 Arginine and proline metabolism 4
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 4
cit01200 Carbon metabolism 4
cit01230 Biosynthesis of amino acids 4
cit00051 Fructose and mannose metabolism 3
cit00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma00010 Glycolysis / Gluconeogenesis 2
gma01200 Carbon metabolism 2
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 4
gma00513 Various types of N-glycan biosynthesis 3
gma00330 Arginine and proline metabolism 2
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 4
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00330 Arginine and proline metabolism 3
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi04626 Plant-pathogen interaction 3
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr03060 Protein export 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 5
mtr00510 N-Glycan biosynthesis 3
mtr00513 Various types of N-glycan biosynthesis 3
mtr00330 Arginine and proline metabolism 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly00330 Arginine and proline metabolism 2
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 5
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta04130 SNARE interactions in vesicular transport 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00053 Ascorbate and aldarate metabolism 2
nta00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00513 Various types of N-glycan biosynthesis 3
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 4
zma01212 Fatty acid metabolism 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 17
tae01230 Biosynthesis of amino acids 17
tae00710 Carbon fixation by Calvin cycle 14
tae00010 Glycolysis / Gluconeogenesis 11
tae00220 Arginine biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 8
tae01230 Biosynthesis of amino acids 8
tae00710 Carbon fixation by Calvin cycle 7
tae00220 Arginine biosynthesis 6
tae00250 Alanine, aspartate and glutamate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi04626 Plant-pathogen interaction 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 6
bdi01230 Biosynthesis of amino acids 6
bdi00010 Glycolysis / Gluconeogenesis 4
bdi00330 Arginine and proline metabolism 3
bdi00030 Pentose phosphate pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836738 103845927 103874104 106440743 106347086 107905546 107937571 102615950 102628780 100527885 100818586 100252283 100252286 18101055 7485620 11439917 11420577 101267095 101245118 102580816 102579923 107769895 107798883 4349012 4331220 100193348 100303994 123129127 123146290 123406152 123432846 8065808 8055347 100835342 100835020
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