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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-r.7   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.9   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-e.2   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.4.bio   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.4.hor   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.4.lig   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.4.str   AT4G38260   transport/golgi organization-like protein (DUF833) 
 ath-m.4.tis   AT4G38260   transport/golgi organization-like protein (DUF833) 
 bra-r.6   103828109   transport and Golgi organization 2 homolog 
 bna-r.1   106358239   uncharacterized LOC106358239 
 bna-r.1   106435545   transport and Golgi organization 2 homolog 
 bna-r.1   106433268   transport and Golgi organization 2 homolog 
 ghi-r.1   121213868   transport and Golgi organization 2 homolog 
 ghi-r.1   121228241   uncharacterized LOC121228241 
 ghi-r.1   121230977   transport and Golgi organization 2 homolog 
 cit-r.1   102619385   uncharacterized LOC102619385 
 cit-r.1   102614185   uncharacterized LOC102614185 
 gma-u.5   100809528   transport and Golgi organization 2 homolog 
 gma-u.5   100801022   transport and Golgi organization 2 homolog 
 gma-u.5   100781226   transport and Golgi organization 2 homolog 
 vvi-u.5   100853903   uncharacterized LOC100853903 
 ppo-u.5   18098153   uncharacterized LOC18098153 
 mtr-u.5   11443405   transport and Golgi organization 2 homolog 
 sly-u.5   101258013   uncharacterized LOC101258013 
 sot-r.1   102602561   transport and Golgi organization 2 homolog 
 sot-r.1   102601221   transport and Golgi organization 2 homolog 
 nta-r.1   107815648   uncharacterized LOC107815648 
 nta-r.1   107810669   uncharacterized LOC107810669 
 nta-r.1   107775770   uncharacterized LOC107775770 
 osa-u.5   4336675   uncharacterized LOC4336675 
 osa-u.5   4346725   uncharacterized LOC4346725 
 zma-u.5   100280184   uncharacterized LOC100280184 
 zma-u.5   100282377   Ser/Thr-rich protein T10 in DGCR region 
 tae-r.2   123159711   transport and Golgi organization 2 homolog 
 tae-r.2   123166661   transport and Golgi organization 2 homolog 
 tae-r.2   123149783   transport and Golgi organization 2 homolog 
 hvu-r.1   123427495   transport and Golgi organization 2 homolog 
 sbi-r.1   8057584   transport and Golgi organization 2 homolog 
 sbi-r.1   110431286   transport and Golgi organization 2 homolog 
 bdi-r.1   100824761   transport and Golgi organization protein 2 homolog 
 bdi-r.1   100839278   transport and Golgi organization 2 homolog 
 cre-r.1   CHLRE_12g548550v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G38260 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G38260 (ath-u.5 coexpression data)

CoexMap"829983"


athAT4G38260 | Entrez gene ID : 829983      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 2 3 1 1 1 1 2 3 2 2 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_568038.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  cysk 1,  cyto_pero 1,  cysk_plas 1  (predict for NP_568038.1)
Subcellular
localization
TargetP
scret 4,  other 3  (predict for NP_568038.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G38260
ath-r.7
for
AT4G38260
ath-m.9
for
AT4G38260
ath-e.2
for
AT4G38260
ath-m.4.bio
for
AT4G38260
ath-m.4.hor
for
AT4G38260
ath-m.4.lig
for
AT4G38260
ath-m.4.str
for
AT4G38260
ath-m.4.tis
for
AT4G38260
bra-r.6
for
103828109
bna-r.1
for
106358239
bna-r.1
for
106435545
bna-r.1
for
106433268
ghi-r.1
for
121213868
ghi-r.1
for
121228241
ghi-r.1
for
121230977
cit-r.1
for
102619385
cit-r.1
for
102614185
gma-u.5
for
100809528
gma-u.5
for
100801022
gma-u.5
for
100781226
vvi-u.5
for
100853903
ppo-u.5
for
18098153
mtr-u.5
for
11443405
sly-u.5
for
101258013
sot-r.1
for
102602561
sot-r.1
for
102601221
nta-r.1
for
107815648
nta-r.1
for
107810669
nta-r.1
for
107775770
osa-u.5
for
4336675
osa-u.5
for
4346725
zma-u.5
for
100280184
zma-u.5
for
100282377
tae-r.2
for
123159711
tae-r.2
for
123166661
tae-r.2
for
123149783
hvu-r.1
for
123427495
sbi-r.1
for
8057584
sbi-r.1
for
110431286
bdi-r.1
for
100824761
bdi-r.1
for
100839278
cre-r.1
for
CHLRE_12g548550v5


Ortholog ID: 3613
Species ath bra bna bna ghi ghi ghi cit cit gma gma gma vvi ppo mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol AT4G38260 LOC103828109 LOC106358239 LOC106435545 LOC107922188 LOC107921420 LOC107898908 LOC102619385 LOC102614185 LOC100809528 LOC100781226 LOC100820362 LOC100853903 LOC18098153 LOC11443405 LOC101258013 LOC102602561 LOC102601221 LOC107815648 LOC107810669 LOC107775770 LOC4336675 LOC4346725 LOC100280184 LOC100282377 LOC123159711 LOC123054165 LOC123190055 LOC123427495 LOC8057584 LOC110431286 LOC100824761 LOC100839278 CHLRE_12g548550v5
Function* transport/golgi organization-like protein (DUF833) transport and Golgi organization 2 homolog uncharacterized LOC106358239 transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization protein 2 homolog uncharacterized LOC102619385 uncharacterized LOC102614185 transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog ser/Thr-rich protein T10 in DGCR region-like uncharacterized LOC100853903 uncharacterized LOC18098153 transport and Golgi organization 2 homolog uncharacterized LOC101258013 transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog uncharacterized LOC107815648 uncharacterized LOC107810669 uncharacterized LOC107775770 uncharacterized LOC4336675 uncharacterized LOC4346725 uncharacterized LOC100280184 Ser/Thr-rich protein T10 in DGCR region transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization 2 homolog transport and Golgi organization protein 2 homolog transport and Golgi organization 2 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna04146 Peroxisome 3
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi00195 Photosynthesis 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
sot04814 Motor proteins 2
sot04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00350 Tyrosine metabolism 2
osa00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
zma00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00330 Arginine and proline metabolism 3
tae00020 Citrate cycle (TCA cycle) 3
tae00480 Glutathione metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 3
sbi00640 Propanoate metabolism 3
sbi00270 Cysteine and methionine metabolism 3
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00941 Flavonoid biosynthesis 4
sbi01200 Carbon metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00562 Inositol phosphate metabolism 2
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829983 103828109 106358239 106435545 107922188 107921420 107898908 102619385 102614185 100809528 100781226 100820362 100853903 18098153 11443405 101258013 102602561 102601221 107815648 107810669 107775770 4336675 4346725 100280184 100282377 123159711 123054165 123190055 123427495 8057584 110431286 100824761 100839278 5719628
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