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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   VAB2   ATPase, V1 complex, subunit B protein 
 ath-r.7   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.9   VAB2   ATPase, V1 complex, subunit B protein 
 ath-e.2   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.4.bio   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.4.hor   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.4.lig   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.4.str   VAB2   ATPase, V1 complex, subunit B protein 
 ath-m.4.tis   VAB2   ATPase, V1 complex, subunit B protein 
 ath-u.5   VAB3   ATPase, V1 complex, subunit B protein 
 ath-u.5   VAB1   ATPase, V1 complex, subunit B protein 
 gma-u.5   100791429   V-type proton ATPase subunit B 2 
 gma-u.5   100804483   V-type proton ATPase subunit B 2 
 gma-u.5   100793764   V-type proton ATPase subunit B 2 
 vvi-u.5   100243574   V-type proton ATPase subunit B 2 
 vvi-u.5   100257413   V-type proton ATPase subunit B 2 
 ppo-u.5   7474990   V-type proton ATPase subunit B 2 
 ppo-u.5   7470417   V-type proton ATPase subunit B 2 
 mtr-u.5   25485635   V-type proton ATPase subunit B2 
 mtr-u.5   11426878   V-type proton ATPase subunit B2 
 sly-u.5   101244132   V-type ATP synthase beta chain 
 sly-u.5   101245703   V-type proton ATPase subunit B 2 
 osa-u.5   4341339   V-type proton ATPase subunit B 1 
 osa-u.5   4327833   V-type proton ATPase subunit B 2 
 zma-u.5   100286306   vacuolar ATP synthase subunit B 
 zma-u.5   100282598   vacuolar ATP synthase subunit B 

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Top 50 coexpressed genes to VAB2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to VAB2 (ath-u.5 coexpression data)

CoexMap"830008"


athVAB2 | Entrez gene ID : 830008      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 3 2 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00190 [list] [network] Oxidative phosphorylation (170 genes)
ath04145 [list] [network] Phagosome (87 genes)
GO BP
GO:0030835 [list] [network] negative regulation of actin filament depolymerization  (9 genes)  IDA  
GO:0051693 [list] [network] actin filament capping  (9 genes)  IDA  
GO:0051017 [list] [network] actin filament bundle assembly  (20 genes)  IDA  
GO CC
GO:0033180 [list] [network] proton-transporting V-type ATPase, V1 domain  (6 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005773 [list] [network] vacuole  (984 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA ISM  
GO MF
GO:0046961 [list] [network] proton-transporting ATPase activity, rotational mechanism  (19 genes)  IEA  
GO:0051015 [list] [network] actin filament binding  (34 genes)  IDA  
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
Protein NP_001031807.1 [sequence] [blastp]
NP_001031808.1 [sequence] [blastp]
NP_001190954.1 [sequence] [blastp]
NP_195563.1 [sequence] [blastp]
NP_974707.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_001031807.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_001031808.1)
cyto 8,  chlo 1,  mito 1,  E.R. 1,  chlo_mito 1  (predict for NP_001190954.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_195563.1)
cyto 5,  cysk 3,  cyto_nucl 3,  cyto_plas 3  (predict for NP_974707.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031807.1)
other 8  (predict for NP_001031808.1)
other 8  (predict for NP_001190954.1)
other 8  (predict for NP_195563.1)
other 8  (predict for NP_974707.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
VAB2
ath-r.7
for
VAB2
ath-m.9
for
VAB2
ath-e.2
for
VAB2
ath-m.4.bio
for
VAB2
ath-m.4.hor
for
VAB2
ath-m.4.lig
for
VAB2
ath-m.4.str
for
VAB2
ath-m.4.tis
for
VAB2
ath-u.5
for
VAB3
ath-u.5
for
VAB1
gma-u.5
for
100791429
gma-u.5
for
100804483
gma-u.5
for
100793764
vvi-u.5
for
100243574
vvi-u.5
for
100257413
ppo-u.5
for
7474990
ppo-u.5
for
7470417
mtr-u.5
for
25485635
mtr-u.5
for
11426878
sly-u.5
for
101244132
sly-u.5
for
101245703
osa-u.5
for
4341339
osa-u.5
for
4327833
zma-u.5
for
100286306
zma-u.5
for
100282598


Ortholog ID: 2043
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol VAB2 VAB1 LOC103872821 LOC103829438 LOC106440744 LOC106347084 LOC107942410 LOC107957609 LOC102617516 LOC100814088 LOC100804483 LOC100243574 LOC100257413 LOC7474990 LOC7470417 LOC11426878 LOC25485635 LOC101245703 LOC101244132 LOC102589496 LOC102593980 LOC107821330 LOC107805728 LOC4341339 LOC4327833 LOC100286306 LOC100282598 LOC123148034 LOC123137033 LOC123444249 LOC123401040 LOC110431024 LOC110434964 LOC100845199 LOC100835507 CHLRE_02g076350v5
Function* ATPase, V1 complex, subunit B protein ATPase, V1 complex, subunit B protein V-type proton ATPase subunit B3 V-type proton ATPase subunit B3 V-type proton ATPase subunit B3-like V-type proton ATPase subunit B3 V-type proton ATPase subunit B 1 V-type proton ATPase subunit B2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B2 V-type proton ATPase subunit B2 V-type proton ATPase subunit B 2 V-type ATP synthase beta chain V-type proton ATPase subunit B2-like V-type proton ATPase subunit B2 V-type proton ATPase subunit B2 V-type proton ATPase subunit B2 V-type proton ATPase subunit B 1 V-type proton ATPase subunit B 2 vacuolar ATP synthase subunit B vacuolar ATP synthase subunit B V-type proton ATPase subunit B 1 V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 2-like V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 1 V-type proton ATPase subunit B 2-like V-type proton ATPase subunit B 2 V-type proton ATPase subunit B 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 16
ath04145 Phagosome 10
ath04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 14
ath00190 Oxidative phosphorylation 13
ath04142 Lysosome 5
ath00010 Glycolysis / Gluconeogenesis 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra04145 Phagosome 9
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 8
bra04145 Phagosome 8
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
bna04145 Phagosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 9
bna04145 Phagosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04145 Phagosome 4
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 6
cit04145 Phagosome 3
cit01200 Carbon metabolism 3
cit00030 Pentose phosphate pathway 2
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 13
gma04145 Phagosome 13
gma04142 Lysosome 4
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 12
gma04145 Phagosome 12
gma04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi00190 Oxidative phosphorylation 3
vvi04145 Phagosome 3
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi04145 Phagosome 4
vvi04142 Lysosome 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 12
ppo04145 Phagosome 11
ppo04142 Lysosome 4
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 6
ppo04145 Phagosome 6
ppo04142 Lysosome 3
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 8
mtr04145 Phagosome 7
mtr04142 Lysosome 5
mtr04144 Endocytosis 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 11
mtr04145 Phagosome 11
mtr04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
sly04145 Phagosome 9
sly04142 Lysosome 5
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04145 Phagosome 6
sly00190 Oxidative phosphorylation 5
sly04142 Lysosome 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 11
sot04145 Phagosome 6
sot01200 Carbon metabolism 4
sot04148 Efferocytosis 2
sot00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 8
sot04145 Phagosome 6
sot04148 Efferocytosis 2
sot00010 Glycolysis / Gluconeogenesis 2
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 14
nta04145 Phagosome 14
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 18
nta04145 Phagosome 18
nta04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 12
osa04145 Phagosome 10
osa04142 Lysosome 5
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 13
osa04145 Phagosome 10
osa04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 14
zma04145 Phagosome 14
zma04142 Lysosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 12
zma04145 Phagosome 12
zma04142 Lysosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 15
tae04145 Phagosome 15
tae04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 10
tae04145 Phagosome 10
tae04142 Lysosome 4
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu00710 Carbon fixation by Calvin cycle 4
hvu01230 Biosynthesis of amino acids 4
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 8
hvu04145 Phagosome 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 14
sbi04145 Phagosome 13
sbi04142 Lysosome 6
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 12
sbi04145 Phagosome 11
sbi04142 Lysosome 4
sbi01200 Carbon metabolism 3
sbi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 10
bdi04145 Phagosome 5
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 10
bdi04145 Phagosome 7
bdi04146 Peroxisome 2
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 9
cre04145 Phagosome 9
cre04142 Lysosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830008 843934 103872821 103829438 106440744 106347084 107942410 107957609 102617516 100814088 100804483 100243574 100257413 7474990 7470417 11426878 25485635 101245703 101244132 102589496 102593980 107821330 107805728 4341339 4327833 100286306 100282598 123148034 123137033 123444249 123401040 110431024 110434964 100845199 100835507 5727211
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