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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   SYN1   Rad21/Rec8-like family protein 
 ath-m.4.bio   SYN1   Rad21/Rec8-like family protein 
 ath-m.4.hor   SYN1   Rad21/Rec8-like family protein 
 ath-m.4.lig   SYN1   Rad21/Rec8-like family protein 
 ath-m.4.str   SYN1   Rad21/Rec8-like family protein 
 ath-m.4.tis   SYN1   Rad21/Rec8-like family protein 
 vvi-u.5   100262148   sister chromatid cohesion 1 protein 1 
 osa-u.5   4339720   sister chromatid cohesion 1 protein 1 
 zma-u.5   732730   absence of first division 1 

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Top 50 coexpressed genes to SYN1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SYN1 (ath-m.9 coexpression data)

CoexMap"830432"


athSYN1 | Entrez gene ID : 830432      
Species ath vvi osa zma tae mtr hvu ghi bdi cit gma bra cre sbi ppo bna sly nta sot
Paralog 6 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051455 [list] [network] spindle attachment to meiosis I kinetochore  (2 genes)  IMP  
GO:0051754 [list] [network] meiotic sister chromatid cohesion, centromeric  (2 genes)  IMP  
GO:0010032 [list] [network] meiotic chromosome condensation  (4 genes)  IMP  
GO:0007062 [list] [network] sister chromatid cohesion  (34 genes)  IMP  
GO:0051276 [list] [network] chromosome organization  (113 genes)  IMP  
GO CC
GO:0008278 [list] [network] cohesin complex  (3 genes)  ISS  
GO:0005694 [list] [network] chromosome  (230 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_196168.1 [sequence] [blastp]
NP_850773.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  vacu 3,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1,  cyto_E.R. 1  (predict for NP_196168.1)
chlo 5,  extr 1,  nucl 1,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1  (predict for NP_850773.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for NP_196168.1)
mito 6  (predict for NP_850773.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
SYN1

.
ath-m.4.bio
for
SYN1

.
ath-m.4.hor
for
SYN1

.
ath-m.4.lig
for
SYN1

.
ath-m.4.str
for
SYN1

.
ath-m.4.tis
for
SYN1

.
vvi-u.5
for
100262148

.
osa-u.5
for
4339720

.
zma-u.5
for
732730

.


Ortholog ID: 7313
Species osa zma vvi tae hvu hvu sbi bdi
Symbol LOC4339720 LOC732730 LOC100262148 LOC123148318 LOC123441926 LOC123451825 LOC8064731 LOC100824802
Function* sister chromatid cohesion 1 protein 1 absence of first division 1 sister chromatid cohesion 1 protein 1 sister chromatid cohesion 1 protein 1 sister chromatid cohesion 1 protein 1-like sister chromatid cohesion 1 protein 1-like sister chromatid cohesion 1 protein 1 sister chromatid cohesion 1 protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4339720 732730 100262148 123148318 123441926 123451825 8064731 100824802
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