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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-r.7   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.9   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-e.2   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.4.bio   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.4.hor   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.4.lig   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.4.str   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 ath-m.4.tis   AT5G08110   UBQ, helicase-c and DEAD-like helicase domain-containing protein 
 gma-u.5   100819522   uncharacterized ATP-dependent helicase YprA 
 vvi-u.5   100257644   uncharacterized LOC100257644 
 ppo-u.5   7487108   uncharacterized LOC7487108 
 mtr-u.5   25488409   uncharacterized ATP-dependent helicase YprA 
 sly-u.5   101244477   uncharacterized LOC101244477 
 osa-u.5   9271765   uncharacterized LOC9271765 
 zma-u.5   103633409   uncharacterized ATP-dependent helicase YprA 

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Top 50 coexpressed genes to AT5G08110 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G08110 (ath-u.5 coexpression data)

CoexMap"830705"


athAT5G08110 | Entrez gene ID : 830705      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036297 [list] [network] interstrand cross-link repair  (9 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005524 [list] [network] ATP binding  (321 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3104 genes)  IEA  
Protein NP_001330594.1 [sequence] [blastp]
NP_001330595.1 [sequence] [blastp]
NP_196428.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 2  (predict for NP_001330594.1)
nucl 7,  cyto 3  (predict for NP_001330595.1)
nucl 7,  cyto 3  (predict for NP_196428.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001330594.1)
other 8  (predict for NP_001330595.1)
other 8  (predict for NP_196428.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G08110
ath-r.7
for
AT5G08110
ath-m.9
for
AT5G08110
ath-e.2
for
AT5G08110
ath-m.4.bio
for
AT5G08110
ath-m.4.hor
for
AT5G08110
ath-m.4.lig
for
AT5G08110
ath-m.4.str
for
AT5G08110
ath-m.4.tis
for
AT5G08110
gma-u.5
for
100819522
vvi-u.5
for
100257644
ppo-u.5
for
7487108
mtr-u.5
for
25488409
sly-u.5
for
101244477
osa-u.5
for
9271765
zma-u.5
for
103633409


Ortholog ID: 7705
Species ath bra ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol AT5G08110 LOC103847576 LOC107912104 LOC107943381 LOC102626625 LOC100819522 LOC100257644 LOC7487108 LOC25488409 LOC101244477 LOC102589199 LOC107788816 LOC107812528 LOC9271765 LOC103633409 LOC123187996 LOC123425373 LOC8060664 LOC100821154 CHLRE_03g187700v5
Function* UBQ, helicase-c and DEAD-like helicase domain-containing protein uncharacterized ATP-dependent helicase YprA uncharacterized ATP-dependent helicase YprA uncharacterized ATP-dependent helicase YprA uncharacterized LOC102626625 uncharacterized ATP-dependent helicase YprA uncharacterized LOC100257644 uncharacterized LOC7487108 uncharacterized ATP-dependent helicase YprA uncharacterized LOC101244477 uncharacterized ATP-dependent helicase YprA uncharacterized LOC107788816 uncharacterized LOC107812528 uncharacterized LOC9271765 uncharacterized ATP-dependent helicase YprA uncharacterized ATP-dependent helicase YprA uncharacterized ATP-dependent helicase YprA-like uncharacterized ATP-dependent helicase YprA uncharacterized ATP-dependent helicase YprA uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 5
bra03030 DNA replication 4
bra03410 Base excision repair 3
bra03420 Nucleotide excision repair 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi04075 Plant hormone signal transduction 4
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03008 Ribosome biogenesis in eukaryotes 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 4
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830705 103847576 107912104 107943381 102626625 100819522 100257644 7487108 25488409 101244477 102589199 107788816 107812528 9271765 103633409 123187996 123425373 8060664 100821154 5717478
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