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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G13560   structural maintenance of chromosomes protein 
 ath-r.7   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.9   AT5G13560   structural maintenance of chromosomes protein 
 ath-e.2   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.4.bio   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.4.hor   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.4.lig   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.4.str   AT5G13560   structural maintenance of chromosomes protein 
 ath-m.4.tis   AT5G13560   structural maintenance of chromosomes protein 
 bra-r.6   103865593   uncharacterized LOC103865593 
 bra-r.6   103850879   myosin-11 
 bna-r.1   BNAC04G45100D   uncharacterized BNAC04G45100D 
 bna-r.1   111205558   uncharacterized LOC111205558 
 ghi-r.1   107930732   uncharacterized LOC107930732 
 ghi-r.1   107959897   uncharacterized LOC107959897 
 ghi-r.1   107897766   uncharacterized LOC107897766 
 cit-r.1   102615746   COP1-interactive protein 1 
 cit-r.1   102613086   uncharacterized LOC102613086 
 gma-u.5   100803121   uncharacterized LOC100803121 
 vvi-u.5   100244989   protein MLP1 
 vvi-u.5   100249942   uncharacterized LOC100249942 
 ppo-u.5   7469790   uncharacterized LOC7469790 
 ppo-u.5   7458616   uncharacterized LOC7458616 
 mtr-u.5   25485747   synaptonemal complex protein 1 
 sly-u.5   101267106   uncharacterized LOC101267106 
 sot-r.1   102596582   coiled-coil domain-containing protein 18-like 
 sot-r.1   102579701   sporulation-specific protein 15-like 
 nta-r.1   107762325   uncharacterized LOC107762325 
 nta-r.1   107767246   uncharacterized LOC107767246 
 nta-r.1   107780496   uncharacterized LOC107780496 
 osa-u.5   4324078   uncharacterized LOC4324078 
 osa-u.5   9272304   uncharacterized LOC9272304 
 zma-u.5   103630051   myosin-2 heavy chain-like 
 zma-u.5   100304331   uncharacterized LOC100304331 
 tae-r.2   123060563   A-kinase anchor protein 9 
 tae-r.2   123077649   A-kinase anchor protein 9 
 tae-r.2   123180612   uncharacterized LOC123180612 
 hvu-r.1   123443064   uncharacterized LOC123443064 
 hvu-r.1   123426281   coiled-coil domain-containing protein 150-like 
 sbi-r.1   8059126   kinesin-like protein KIF27 
 sbi-r.1   8071201   myosin-10 
 bdi-r.1   100840108   cytadherence high molecular weight protein 2 
 bdi-r.1   100834063   uncharacterized LOC100834063 
 bdi-r.1   100824671   protein Hook homolog 3 

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Top 50 coexpressed genes to AT5G13560 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G13560 (ath-u.5 coexpression data)

CoexMap"831200"


athAT5G13560 | Entrez gene ID : 831200      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 2 3 2 1 2 2 1 1 2 3 2 2 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
Protein NP_196860.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  cyto_nucl 1  (predict for NP_196860.2)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_196860.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G13560
ath-r.7
for
AT5G13560
ath-m.9
for
AT5G13560
ath-e.2
for
AT5G13560
ath-m.4.bio
for
AT5G13560
ath-m.4.hor
for
AT5G13560
ath-m.4.lig
for
AT5G13560
ath-m.4.str
for
AT5G13560
ath-m.4.tis
for
AT5G13560
bra-r.6
for
103865593
bra-r.6
for
103850879
bna-r.1
for
BNAC04G45100D
bna-r.1
for
111205558
ghi-r.1
for
107930732
ghi-r.1
for
107959897
ghi-r.1
for
107897766
cit-r.1
for
102615746
cit-r.1
for
102613086
gma-u.5
for
100803121
vvi-u.5
for
100244989
vvi-u.5
for
100249942
ppo-u.5
for
7469790
ppo-u.5
for
7458616
mtr-u.5
for
25485747
sly-u.5
for
101267106
sot-r.1
for
102596582
sot-r.1
for
102579701
nta-r.1
for
107762325
nta-r.1
for
107767246
nta-r.1
for
107780496
osa-u.5
for
4324078
osa-u.5
for
9272304
zma-u.5
for
103630051
zma-u.5
for
100304331
tae-r.2
for
123060563
tae-r.2
for
123077649
tae-r.2
for
123180612
hvu-r.1
for
123443064
hvu-r.1
for
123426281
sbi-r.1
for
8059126
sbi-r.1
for
8071201
bdi-r.1
for
100840108
bdi-r.1
for
100834063
bdi-r.1
for
100824671


Ortholog ID: 2994
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma vvi vvi ppo ppo mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi bdi
Symbol AT5G13560 LOC103850879 LOC103846562 LOC125579053 LOC106384260 LOC106447380 LOC107930732 LOC107959897 LOC107926079 LOC102615746 LOC102613086 LOC100803121 LOC100244989 LOC100249942 LOC7469790 LOC7458616 LOC25485747 LOC101267106 LOC102596582 LOC102579701 LOC107762325 LOC107780496 LOC107820666 LOC4324078 LOC9272304 LOC103630051 LOC100304331 LOC123077649 LOC123180612 LOC123039280 LOC123443064 LOC123426281 LOC8059126 LOC8071201 LOC100840108 LOC100834063 LOC100824671
Function* structural maintenance of chromosomes protein myosin-11 myosin-11 myosin-11-like myosin-11-like polyamine-modulated factor 1-binding protein 1 uncharacterized LOC107930732 uncharacterized LOC107959897 uncharacterized LOC107926079 COP1-interactive protein 1 uncharacterized LOC102613086 uncharacterized LOC100803121 protein MLP1 uncharacterized LOC100249942 uncharacterized LOC7469790 uncharacterized LOC7458616 synaptonemal complex protein 1 uncharacterized LOC101267106 coiled-coil domain-containing protein 18-like sporulation-specific protein 15-like uncharacterized LOC107762325 uncharacterized LOC107780496 uncharacterized LOC107820666 uncharacterized LOC4324078 uncharacterized LOC9272304 myosin-2 heavy chain-like uncharacterized LOC100304331 A-kinase anchor protein 9 uncharacterized LOC123180612 coiled-coil domain-containing protein 150 uncharacterized LOC123443064 coiled-coil domain-containing protein 150-like kinesin-like protein KIF27 myosin-10 cytadherence high molecular weight protein 2 uncharacterized LOC100834063 protein Hook homolog 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 3
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 3
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 3
mtr04130 SNARE interactions in vesicular transport 2
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04144 Endocytosis 2
nta03022 Basal transcription factors 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03250 Viral life cycle - HIV-1 4
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 2
tae00071 Fatty acid degradation 2
tae01212 Fatty acid metabolism 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03450 Non-homologous end-joining 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03450 Non-homologous end-joining 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831200 103850879 103846562 125579053 106384260 106447380 107930732 107959897 107926079 102615746 102613086 100803121 100244989 100249942 7469790 7458616 25485747 101267106 102596582 102579701 107762325 107780496 107820666 4324078 9272304 103630051 100304331 123077649 123180612 123039280 123443064 123426281 8059126 8071201 100840108 100834063 100824671
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