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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-r.7   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.9   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-e.2   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.bio   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.hor   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.lig   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.str   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 ath-m.4.tis   ELF9   RNA binding (RRM/RBD/RNP motifs) family protein 
 bra-r.6   103846340   splicing factor U2AF-associated protein 2 
 bna-r.1   106372015   splicing factor U2AF-associated protein 2 
 bna-r.1   106372209   splicing factor U2AF-associated protein 2 
 ghi-r.1   107951796   HIV Tat-specific factor 1 homolog 
 ghi-r.1   107949539   HIV Tat-specific factor 1 
 cit-r.1   102610862   splicing factor U2AF-associated protein 2 
 gma-u.5   100804655   splicing factor U2AF-associated protein 2 
 gma-u.5   100789709   splicing factor U2AF-associated protein 2 
 vvi-u.5   100853013   uncharacterized LOC100853013 
 ppo-u.5   7474390   splicing factor U2AF-associated protein 2 
 ppo-u.5   7462120   splicing factor U2AF-associated protein 2 
 mtr-u.5   25484593   splicing factor U2AF-associated protein 2 
 sly-u.5   101251141   splicing factor U2AF-associated protein 2 
 sot-r.1   102603870   HIV Tat-specific factor 1 homolog 
 nta-r.1   107830823   uncharacterized LOC107830823 
 nta-r.1   107762319   uncharacterized LOC107762319 
 osa-u.5   4336279   splicing factor U2AF-associated protein 2 
 zma-u.5   100192742   uncharacterized LOC100192742 
 zma-u.5   100273316   RNA binding (RRM/RBD/RNP motifs) family protein 
 tae-r.2   123053768   splicing factor U2AF-associated protein 2 
 tae-r.2   123045899   splicing factor U2AF-associated protein 2 
 tae-r.2   123189656   splicing factor U2AF-associated protein 2 
 hvu-r.1   123427120   splicing factor U2AF-associated protein 2 
 sbi-r.1   8083078   splicing factor U2AF-associated protein 2 
 sbi-r.1   8070369   HIV Tat-specific factor 1 homolog 
 bdi-r.1   100845144   splicing factor U2AF-associated protein 2 
 cre-r.1   CHLRE_17g707050v5   uncharacterized protein 

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Top 50 coexpressed genes to ELF9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ELF9 (ath-u.5 coexpression data)

CoexMap"831486"


athELF9 | Entrez gene ID : 831486      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 2 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (7 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (112 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_197130.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1  (predict for NP_197130.1)
Subcellular
localization
TargetP
other 8  (predict for NP_197130.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ELF9
ath-r.7
for
ELF9
ath-m.9
for
ELF9
ath-e.2
for
ELF9
ath-m.4.bio
for
ELF9
ath-m.4.hor
for
ELF9
ath-m.4.lig
for
ELF9
ath-m.4.str
for
ELF9
ath-m.4.tis
for
ELF9
bra-r.6
for
103846340
bna-r.1
for
106372015
bna-r.1
for
106372209
ghi-r.1
for
107951796
ghi-r.1
for
107949539
cit-r.1
for
102610862
gma-u.5
for
100804655
gma-u.5
for
100789709
vvi-u.5
for
100853013
ppo-u.5
for
7474390
ppo-u.5
for
7462120
mtr-u.5
for
25484593
sly-u.5
for
101251141
sot-r.1
for
102603870
nta-r.1
for
107830823
nta-r.1
for
107762319
osa-u.5
for
4336279
zma-u.5
for
100192742
zma-u.5
for
100273316
tae-r.2
for
123053768
tae-r.2
for
123045899
tae-r.2
for
123189656
hvu-r.1
for
123427120
sbi-r.1
for
8083078
sbi-r.1
for
8070369
bdi-r.1
for
100845144
cre-r.1
for
CHLRE_17g707050v5


Ortholog ID: 8601
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi sbi bdi cre
Symbol ELF9 LOC103846340 LOC106372015 LOC106372209 LOC107951796 LOC107949539 LOC102610862 LOC100804655 LOC100789709 LOC100853013 LOC7474390 LOC7462120 LOC25484593 LOC101251141 LOC102603870 LOC107830823 LOC107762319 LOC4336279 LOC100192742 LOC100273316 LOC123053768 LOC123045899 LOC123189656 LOC123427120 LOC8083078 LOC8070369 LOC100845144 CHLRE_17g707050v5
Function* RNA binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog HIV Tat-specific factor 1 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 uncharacterized LOC100853013 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog uncharacterized LOC107830823 uncharacterized LOC107762319 splicing factor U2AF-associated protein 2 uncharacterized LOC100192742 RNA binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 splicing factor U2AF-associated protein 2 HIV Tat-specific factor 1 homolog splicing factor U2AF-associated protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
mtr03010 Ribosome 2
mtr03040 Spliceosome 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
tae03410 Base excision repair 3
tae00270 Cysteine and methionine metabolism 3
tae00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831486 103846340 106372015 106372209 107951796 107949539 102610862 100804655 100789709 100853013 7474390 7462120 25484593 101251141 102603870 107830823 107762319 4336279 100192742 100273316 123053768 123045899 123189656 123427120 8083078 8070369 100845144 66056930
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