ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-r.7	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.9	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-e.2	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.4.bio	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.4.hor	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.4.lig	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.4.str	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-m.4.tis	AT5G23130	Peptidoglycan-binding LysM domain-containing protein
ath-u.5	AT5G08200	peptidoglycan-binding LysM domain-containing protein
gma-u.5	100816543	uncharacterized LOC100816543
gma-u.5	100786430	peptidoglycan-binding LysM domain-containing protein
vvi-u.5	100250730	uncharacterized LOC100250730
vvi-u.5	100266699	uncharacterized LOC100266699
ppo-u.5	7485197	uncharacterized LOC7485197
ppo-u.5	7492078	uncharacterized LOC7492078
ppo-u.5	7456314	uncharacterized LOC7456314
mtr-u.5	11427858	uncharacterized LOC11427858
mtr-u.5	25482819	uncharacterized LOC25482819
sly-u.5	101258614	uncharacterized LOC101258614
sly-u.5	101259006	uncharacterized LOC101259006
osa-u.5	4348943	uncharacterized LOC4348943
osa-u.5	9267060	uncharacterized LOC9267060
zma-u.5	100279352	lysM domain containing protein
zma-u.5	103630688	peptidoglycan-binding LysM domain-containing protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_197704.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, cysk 1

(predict for NP_197704.2)

Subcellular
localization
TargetP

mito 7, chlo 5

(predict for NP_197704.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G23130	ath-r.7 for AT5G23130	ath-m.9 for AT5G23130	ath-e.2 for AT5G23130	ath-m.4.bio for AT5G23130	ath-m.4.hor for AT5G23130	ath-m.4.lig for AT5G23130	ath-m.4.str for AT5G23130	ath-m.4.tis for AT5G23130	ath-u.5 for AT5G08200	gma-u.5 for 100816543	gma-u.5 for 100786430	vvi-u.5 for 100250730	vvi-u.5 for 100266699	ppo-u.5 for 7485197	ppo-u.5 for 7492078	ppo-u.5 for 7456314	mtr-u.5 for 11427858	mtr-u.5 for 25482819	sly-u.5 for 101258614	sly-u.5 for 101259006	osa-u.5 for 4348943	osa-u.5 for 9267060	zma-u.5 for 100279352	zma-u.5 for 103630688

Ortholog

Ortholog ID: 1814

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

Peptidoglycan-binding LysM domain-containing protein

peptidoglycan-binding LysM domain-containing protein

uncharacterized LOC103855766

uncharacterized LOC106419488

uncharacterized BNAC07G49750D

uncharacterized LOC107894038

uncharacterized LOC102631269

uncharacterized LOC102609373

uncharacterized LOC100780383

uncharacterized LOC100250730

uncharacterized LOC100266699

uncharacterized LOC7485197

uncharacterized LOC7456314

uncharacterized LOC11427858

uncharacterized LOC25482819

uncharacterized LOC101258614

uncharacterized LOC101259006

uncharacterized LOC102589961

uncharacterized LOC102602521

uncharacterized LOC107796282

uncharacterized LOC107798601

uncharacterized LOC4348943

uncharacterized LOC9267060

lysM domain containing protein

uncharacterized LOC123094023

uncharacterized LOC123046439

uncharacterized LOC123431717

uncharacterized LOC123409309

uncharacterized LOC8067130

uncharacterized LOC8066391

uncharacterized LOC100829464

lysM and putative peptidoglycan-binding domain-containing protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	5
bra05100	Bacterial invasion of epithelial cells	3
bra04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4
ghi00510	N-Glycan biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	2
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2
sly03083	Polycomb repressive complex	2
sly04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00510	N-Glycan biosynthesis	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00240	Pyrimidine metabolism	2
osa01232	Nucleotide metabolism	2
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00330	Arginine and proline metabolism	2
zma00410	beta-Alanine metabolism	2
zma00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04081	Hormone signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	3
tae03015	mRNA surveillance pathway	2
tae04136	Autophagy - other	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04142	Lysosome	2
hvu04144	Endocytosis	2
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	3
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00240	Pyrimidine metabolism	2
bdi01232	Nucleotide metabolism	2
bdi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04130	SNARE interactions in vesicular transport	2

Expression

Expression pattern

Entrez Gene ID^*

832377

830716

103855766

106419488

106377289

107894038

102631269

102609373

100780383

100250730

100266699

7485197

7456314

11427858

25482819

101258614

101259006

102589961

102602521

107796282

107798601

4348943

9267060

100279352

100283704

123094023

123046439

123431717

123409309

8067130

8066391

100829464

100832309

5717973

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G23130 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G23130 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	10	2	2	3	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G23130 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G23130 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**