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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   YUC6   Flavin-binding monooxygenase family protein 
 ath-r.7   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.9   YUC6   Flavin-binding monooxygenase family protein 
 ath-e.2   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.4.bio   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.4.hor   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.4.lig   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.4.str   YUC6   Flavin-binding monooxygenase family protein 
 ath-m.4.tis   YUC6   Flavin-binding monooxygenase family protein 
 ath-u.5   YUC2   Flavin-binding monooxygenase family protein 
 gma-u.5   100808651   indole-3-pyruvate monooxygenase YUCCA6 
 gma-u.5   100804746   indole-3-pyruvate monooxygenase YUCCA6 
 vvi-u.5   100252539   indole-3-pyruvate monooxygenase YUCCA6 
 ppo-u.5   7495723   indole-3-pyruvate monooxygenase YUCCA6 
 mtr-u.5   25496931   indole-3-pyruvate monooxygenase YUCCA2 
 mtr-u.5   11434188   indole-3-pyruvate monooxygenase YUCCA6 
 mtr-u.5   11436651   indole-3-pyruvate monooxygenase YUCCA6 
 sly-u.5   FZY2   flavin monooxygenase-like protein 
 osa-u.5   4326734   indole-3-pyruvate monooxygenase YUCCA4-like 
 osa-u.5   9267047   indole-3-pyruvate monooxygenase YUCCA2 
 zma-u.5   103649553   indole-3-pyruvate monooxygenase YUCCA4 
 zma-u.5   100283420   uncharacterized LOC100283420 

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Top 50 coexpressed genes to YUC6 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to YUC6 (ath-u.5 coexpression data)

CoexMap"832638"


athYUC6 | Entrez gene ID : 832638      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 2 1 1 3 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00380 [list] [network] Tryptophan metabolism (64 genes)
ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009819 [list] [network] drought recovery  (12 genes)  IMP  
GO:0009851 [list] [network] auxin biosynthetic process  (26 genes)  IMP  
GO:0010262 [list] [network] somatic embryogenesis  (27 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IEP  
GO:0010038 [list] [network] response to metal ion  (261 genes)  IDA  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IMP  
GO CC
GO MF
GO:0047134 [list] [network] protein-disulfide reductase [NAD(P)H] activity  (9 genes)  IDA  
Protein NP_001190399.2 [sequence] [blastp]
NP_197944.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  mito 1  (predict for NP_001190399.2)
cyto 7,  mito 1,  pero 1,  cysk 1,  chlo_mito 1,  cyto_mito 1,  mito_plas 1  (predict for NP_197944.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001190399.2)
other 8  (predict for NP_197944.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
YUC6
ath-r.7
for
YUC6
ath-m.9
for
YUC6
ath-e.2
for
YUC6
ath-m.4.bio
for
YUC6
ath-m.4.hor
for
YUC6
ath-m.4.lig
for
YUC6
ath-m.4.str
for
YUC6
ath-m.4.tis
for
YUC6
ath-u.5
for
YUC2
gma-u.5
for
100808651
gma-u.5
for
100804746
vvi-u.5
for
100252539
ppo-u.5
for
7495723
mtr-u.5
for
25496931
mtr-u.5
for
11434188
mtr-u.5
for
11436651
sly-u.5
for
FZY2
osa-u.5
for
4326734
osa-u.5
for
9267047
zma-u.5
for
103649553
zma-u.5
for
100283420


Ortholog ID: 2231
Species ath ath bra bna bna ghi ghi gma vvi ppo mtr mtr sly sot nta nta osa osa zma zma hvu sbi sbi bdi
Symbol YUC2 YUC6 LOC103854740 LOC106348545 LOC111207578 LOC121218309 LOC107901232 LOC100799546 LOC100252539 LOC7495723 LOC25496931 LOC11436651 FZY2 LOC102590029 LOC107825958 LOC107791151 LOC4326734 LOC9267047 LOC103649553 LOC100283420 LOC123440209 LOC8075537 LOC8079475 LOC100839609
Function* Flavin-binding monooxygenase family protein Flavin-binding monooxygenase family protein indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA2 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA2 indole-3-pyruvate monooxygenase YUCCA6 flavin monooxygenase-like protein indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA6-like indole-3-pyruvate monooxygenase YUCCA6 indole-3-pyruvate monooxygenase YUCCA4-like indole-3-pyruvate monooxygenase YUCCA2 indole-3-pyruvate monooxygenase YUCCA4 uncharacterized LOC100283420 indole-3-pyruvate monooxygenase YUCCA2-like indole-3-pyruvate monooxygenase YUCCA2 indole-3-pyruvate monooxygenase YUCCA2 indole-3-pyruvate monooxygenase YUCCA2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00380 Tryptophan metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 3
bra00564 Glycerophospholipid metabolism 3
bra00062 Fatty acid elongation 2
bra04626 Plant-pathogen interaction 2
bra04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 8
bna04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 6
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 6
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
gma00909 Sesquiterpenoid and triterpenoid biosynthesis 2
gma00380 Tryptophan metabolism 2
gma04075 Plant hormone signal transduction 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
mtr00270 Cysteine and methionine metabolism 2
mtr00908 Zeatin biosynthesis 2
mtr00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr00908 Zeatin biosynthesis 3
mtr00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 3
sly00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826956 832638 103854740 106348545 111207578 121218309 107901232 100799546 100252539 7495723 25496931 11436651 101256506 102590029 107825958 107791151 4326734 9267047 103649553 100283420 123440209 8075537 8079475 100839609
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