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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.9   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   AT5G35970   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100816409   DNA-binding protein SMUBP-2 
 gma-u.5   100799347   DNA-binding protein SMUBP-2 
 vvi-u.5   100261474   uncharacterized LOC100261474 
 ppo-u.5   7482421   uncharacterized LOC7482421 
 mtr-u.5   25482868   DNA-binding protein SMUBP-2 
 sly-u.5   101246606   DNA polymerase alpha-associated DNA helicase A 
 osa-u.5   4330452   DNA polymerase alpha-associated DNA helicase A 
 osa-u.5   4346450   DNA polymerase alpha-associated DNA helicase A 
 zma-u.5   103632538   DNA-binding protein SMUBP-2 

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Top 50 coexpressed genes to AT5G35970 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G35970 (ath-u.5 coexpression data)

CoexMap"833589"


athAT5G35970 | Entrez gene ID : 833589      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_198446.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1,  cyto_mito 1  (predict for NP_198446.3)
Subcellular
localization
TargetP
chlo 8  (predict for NP_198446.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G35970

.
ath-r.7
for
AT5G35970

.
ath-m.9
for
AT5G35970

.
ath-e.2
for
AT5G35970

.
ath-m.4.bio
for
AT5G35970

.
ath-m.4.hor
for
AT5G35970

.
ath-m.4.lig
for
AT5G35970

.
ath-m.4.str
for
AT5G35970

.
ath-m.4.tis
for
AT5G35970

.
gma-u.5
for
100816409

.
gma-u.5
for
100799347

.
vvi-u.5
for
100261474

.
ppo-u.5
for
7482421

.
mtr-u.5
for
25482868

.
sly-u.5
for
101246606

.
osa-u.5
for
4330452

.
osa-u.5
for
4346450

.
zma-u.5
for
103632538

.


Ortholog ID: 7358
Species ath gma gma sly osa osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol AT5G35970 LOC100816409 LOC100799347 LOC101246606 LOC4346450 LOC4330452 LOC103632538 LOC103849186 LOC100261474 LOC7482421 LOC25482868 LOC123128120 LOC123111508 LOC123401617 LOC123395300 LOC107913562 LOC107891390 LOC106390831 LOC106408885 LOC8064666 LOC8073162 LOC102594548 LOC102630173 LOC100838511 LOC100845695 LOC107804694 LOC107795928
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA polymerase alpha-associated DNA helicase A DNA polymerase alpha-associated DNA helicase A DNA polymerase alpha-associated DNA helicase A DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 uncharacterized LOC100261474 uncharacterized LOC7482421 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2-like DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 uncharacterized LOC102630173 DNA-binding protein SMUBP-2 DNA-binding protein SMUBP-2 DNA polymerase alpha-associated DNA helicase A DNA polymerase alpha-associated DNA helicase A-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 6
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 5
sly04712 Circadian rhythm - plant 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 2
tae00053 Ascorbate and aldarate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi01200 Carbon metabolism 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00906 Carotenoid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00380 Tryptophan metabolism 3
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833589 100816409 100799347 101246606 4346450 4330452 103632538 103849186 100261474 7482421 25482868 123128120 123111508 123401617 123395300 107913562 107891390 106390831 106408885 8064666 8073162 102594548 102630173 100838511 100845695 107804694 107795928
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