ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT3G62500	F-box protein RMF
vvi-u.5	104881962	probable F-box protein At3g61730
osa-u.5	4324638	probable F-box protein At3g61730

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0005515 [list] [network] protein binding

(5363 genes)

IPI

Protein

NP_198449.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, cyto_nucl 4

(predict for NP_198449.1)

Subcellular
localization
TargetP

other 8

(predict for NP_198449.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT3G62500	vvi-u.5 for 104881962	osa-u.5 for 4324638

Ortholog ID: 5337

Species

bna

vvi

osa

bdi

Symbol

Function^*

probable F-box protein At3g61730

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	2
osa04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

106433930

106353290

104881962

4324638

100829279


Species	ath	vvi	osa	bdi	bra	gma	ppo	sbi	ghi	sot	nta	cre	tae	zma	mtr	hvu	cit	bna	sly
Paralog	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT3G62500 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G62500 (ath-u.5 coexpression data)

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G62500 (ath-u.5 coexpression data)

Top 50 enrichment test to AT3G62500 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**