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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G39840   ATP-dependent RNA helicase 
 ath-r.7   AT5G39840   ATP-dependent RNA helicase 
 ath-m.9   AT5G39840   ATP-dependent RNA helicase 
 ath-e.2   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.bio   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.hor   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.lig   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.str   AT5G39840   ATP-dependent RNA helicase 
 ath-m.4.tis   AT5G39840   ATP-dependent RNA helicase 
 gma-u.5   100777064   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 gma-u.5   100777114   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 vvi-u.5   100853943   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 ppo-u.5   7495967   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 mtr-u.5   25495300   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 sly-u.5   101262978   DExH-box ATP-dependent RNA helicase DExH18, mitochondrial 
 osa-u.5   4336047   ATP-dependent RNA helicase SUV3L, mitochondrial-like 
 zma-u.5   100285160   ATP-dependent RNA helicase SUV3 

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Top 50 coexpressed genes to AT5G39840 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G39840 (ath-u.5 coexpression data)

CoexMap"833980"


athAT5G39840 | Entrez gene ID : 833980      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (42 genes)  IEA  
Protein NP_198800.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for NP_198800.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for NP_198800.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G39840
ath-r.7
for
AT5G39840
ath-m.9
for
AT5G39840
ath-e.2
for
AT5G39840
ath-m.4.bio
for
AT5G39840
ath-m.4.hor
for
AT5G39840
ath-m.4.lig
for
AT5G39840
ath-m.4.str
for
AT5G39840
ath-m.4.tis
for
AT5G39840
gma-u.5
for
100777064
gma-u.5
for
100777114
vvi-u.5
for
100853943
ppo-u.5
for
7495967
mtr-u.5
for
25495300
sly-u.5
for
101262978
osa-u.5
for
4336047
zma-u.5
for
100285160


Ortholog ID: 9706
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa tae tae hvu sbi bdi
Symbol AT5G39840 LOC103849896 LOC106347824 LOC106446024 LOC107892394 LOC121206475 LOC102629021 LOC100777064 LOC100777114 LOC100853943 LOC7495967 LOC25495300 LOC101262978 LOC102594581 LOC107818603 LOC107808650 LOC4336047 LOC123045661 LOC123189427 LOC123426908 LOC110436085 LOC100821887
Function* ATP-dependent RNA helicase DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial DExH-box ATP-dependent RNA helicase DExH18, mitochondrial-like ATP-dependent RNA helicase SUV3L, mitochondrial-like ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial ATP-dependent RNA helicase SUV3L, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
nta03018 RNA degradation 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833980 103849896 106347824 106446024 107892394 121206475 102629021 100777064 100777114 100853943 7495967 25495300 101262978 102594581 107818603 107808650 4336047 123045661 123189427 123426908 110436085 100821887
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