Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATS   Homeodomain-like superfamily protein 
 ath-r.7   ATS   Homeodomain-like superfamily protein 
 ath-m.9   ATS   Homeodomain-like superfamily protein 
 ath-e.2   ATS   Homeodomain-like superfamily protein 
 ath-m.4.bio   ATS   Homeodomain-like superfamily protein 
 ath-m.4.hor   ATS   Homeodomain-like superfamily protein 
 ath-m.4.lig   ATS   Homeodomain-like superfamily protein 
 ath-m.4.str   ATS   Homeodomain-like superfamily protein 
 ath-m.4.tis   ATS   Homeodomain-like superfamily protein 
 gma-u.5   100778242   probable transcription factor KAN4 
 vvi-u.5   100259077   probable transcription factor KAN4 
 ppo-u.5   18104963   probable transcription factor KAN4 
 mtr-u.5   11420402   probable transcription factor KAN4 
 osa-u.5   4352677   uncharacterized LOC4352677 
 zma-u.5   109939610   probable transcription factor GLK2 

close


Top 50 coexpressed genes to ATS (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to ATS (ath-u.5 coexpression data)

CoexMap"834270"


athATS | Entrez gene ID : 834270      
Species ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi sly ghi sot nta cre tae
Paralog 9 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010158 [list] [network] abaxial cell fate specification  (10 genes)  IEA  
GO:0080060 [list] [network] integument development  (12 genes)  IGI IMP  
GO:0048481 [list] [network] plant ovule development  (68 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IMP TAS  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001119363.1 [sequence] [blastp]
NP_199077.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001119363.1)
nucl 9  (predict for NP_199077.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001119363.1)
other 4  (predict for NP_199077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATS
ath-r.7
for
ATS
ath-m.9
for
ATS
ath-e.2
for
ATS
ath-m.4.bio
for
ATS
ath-m.4.hor
for
ATS
ath-m.4.lig
for
ATS
ath-m.4.str
for
ATS
ath-m.4.tis
for
ATS
gma-u.5
for
100778242
vvi-u.5
for
100259077
ppo-u.5
for
18104963
mtr-u.5
for
11420402
osa-u.5
for
4352677
zma-u.5
for
109939610


Ortholog ID: 5384
Species ath ghi ghi cit gma vvi ppo mtr sot nta nta osa zma hvu hvu sbi bdi
Symbol ATS LOC107942680 LOC107935574 LOC102608304 LOC100778242 LOC100259077 LOC18104963 LOC11420402 LOC102598644 LOC107825485 LOC107775986 LOC4352677 LOC109939610 LOC123399308 LOC123452392 LOC8069722 LOC100840568
Function* Homeodomain-like superfamily protein probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 probable transcription factor KAN4 putative transcription factor KAN4 putative transcription factor KAN4 uncharacterized LOC4352677 probable transcription factor GLK2 uncharacterized LOC123399308 probable transcription factor RL9 uncharacterized LOC8069722 uncharacterized LOC100840568
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00591 Linoleic acid metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834270 107942680 107935574 102608304 100778242 100259077 18104963 11420402 102598644 107825485 107775986 4352677 109939610 123399308 123452392 8069722 100840568
The preparation time of this page was 0.1 [sec].