Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-r.7   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.9   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-e.2   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.4.bio   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.4.hor   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.4.lig   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.4.str   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 ath-m.4.tis   AT5G42660   DNA-directed RNA polymerase subunit beta (DUF616) 
 bra-r.6   103857257   uncharacterized LOC103857257 
 bna-r.1   106387906   probable hexosyltransferase MUCI70 
 bna-r.1   106406692   probable hexosyltransferase MUCI70 
 bna-r.1   BNAC09G26830D   probable hexosyltransferase MUCI70 
 ghi-r.1   107943013   probable hexosyltransferase MUCI70 
 ghi-r.1   107935605   probable hexosyltransferase MUCI70 
 cit-r.1   102614528   probable hexosyltransferase MUCI70 
 gma-u.5   100812230   probable hexosyltransferase MUCI70 
 gma-u.5   100780738   probable hexosyltransferase MUCI70 
 vvi-u.5   100266014   probable hexosyltransferase MUCI70 
 ppo-u.5   7461726   probable hexosyltransferase MUCI70 
 mtr-u.5   11414257   probable hexosyltransferase MUCI70 
 sly-u.5   101245644   probable hexosyltransferase MUCI70 
 sot-r.1   102590305   uncharacterized LOC102590305 
 nta-r.1   107822013   putative hexosyltransferase MUCI70 
 nta-r.1   107790029   putative hexosyltransferase MUCI70 
 osa-u.5   4325554   probable hexosyltransferase MUCI70 
 osa-u.5   9266933   probable hexosyltransferase MUCI70 
 zma-u.5   100285659   uncharacterized LOC100285659 
 zma-u.5   100285443   EMB2756 
 tae-r.2   123061918   probable hexosyltransferase MUCI70 
 tae-r.2   123070607   probable hexosyltransferase MUCI70 
 tae-r.2   123079013   probable hexosyltransferase MUCI70 
 hvu-r.1   123444405   probable hexosyltransferase MUCI70 
 hvu-r.1   123452405   probable hexosyltransferase MUCI70 
 sbi-r.1   8075577   uncharacterized LOC8075577 
 sbi-r.1   8083965   uncharacterized LOC8083965 
 bdi-r.1   100839040   uncharacterized LOC100839040 
 bdi-r.1   100835411   uncharacterized LOC100835411 

close


Top 50 coexpressed genes to AT5G42660 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G42660 (ath-u.5 coexpression data)

CoexMap"834275"


athAT5G42660 | Entrez gene ID : 834275      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 2 1 2 1 1 1 1 1 2 2 2 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0016757 [list] [network] glycosyltransferase activity  (554 genes)  ISM  
Protein NP_568609.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  chlo 1,  E.R. 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_568609.2)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_568609.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G42660
ath-r.7
for
AT5G42660
ath-m.9
for
AT5G42660
ath-e.2
for
AT5G42660
ath-m.4.bio
for
AT5G42660
ath-m.4.hor
for
AT5G42660
ath-m.4.lig
for
AT5G42660
ath-m.4.str
for
AT5G42660
ath-m.4.tis
for
AT5G42660
bra-r.6
for
103857257
bna-r.1
for
106387906
bna-r.1
for
106406692
bna-r.1
for
BNAC09G26830D
ghi-r.1
for
107943013
ghi-r.1
for
107935605
cit-r.1
for
102614528
gma-u.5
for
100812230
gma-u.5
for
100780738
vvi-u.5
for
100266014
ppo-u.5
for
7461726
mtr-u.5
for
11414257
sly-u.5
for
101245644
sot-r.1
for
102590305
nta-r.1
for
107822013
nta-r.1
for
107790029
osa-u.5
for
4325554
osa-u.5
for
9266933
zma-u.5
for
100285659
zma-u.5
for
100285443
tae-r.2
for
123061918
tae-r.2
for
123070607
tae-r.2
for
123079013
hvu-r.1
for
123444405
hvu-r.1
for
123452405
sbi-r.1
for
8075577
sbi-r.1
for
8083965
bdi-r.1
for
100839040
bdi-r.1
for
100835411


Ortholog ID: 6365
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol AT5G42660 LOC103857257 LOC106406692 BNAC09G26830D LOC106387527 LOC107943013 LOC107935605 LOC102614528 LOC100812230 LOC100780738 LOC100266014 LOC7461726 LOC11414257 LOC101245644 LOC102590305 LOC107822013 LOC107790029 LOC4325554 LOC9266933 LOC100285659 LOC100285443 LOC123079013 LOC123105155 LOC123122962 LOC123444405 LOC123452405 LOC8075577 LOC8083965 LOC100839040 LOC100835411
Function* DNA-directed RNA polymerase subunit beta (DUF616) uncharacterized LOC103857257 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 uncharacterized LOC102590305 putative hexosyltransferase MUCI70 putative hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 uncharacterized LOC100285659 EMB2756 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 probable hexosyltransferase MUCI70 uncharacterized LOC8075577 uncharacterized LOC8083965 uncharacterized LOC100839040 uncharacterized LOC100835411
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00541 Biosynthesis of various nucleotide sugars 2
vvi01250 Biosynthesis of nucleotide sugars 2
vvi00564 Glycerophospholipid metabolism 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00520 Amino sugar and nucleotide sugar metabolism 5
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834275 103857257 106406692 106366394 106387527 107943013 107935605 102614528 100812230 100780738 100266014 7461726 11414257 101245644 102590305 107822013 107790029 4325554 9266933 100285659 100285443 123079013 123105155 123122962 123444405 123452405 8075577 8083965 100839040 100835411
The preparation time of this page was 0.2 [sec].