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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   GLK2   GOLDEN2-like 2 
 ath-r.7   GLK2   GOLDEN2-like 2 
 ath-m.9   GLK2   GOLDEN2-like 2 
 ath-e.2   GLK2   GOLDEN2-like 2 
 ath-m.4.bio   GLK2   GOLDEN2-like 2 
 ath-m.4.hor   GLK2   GOLDEN2-like 2 
 ath-m.4.lig   GLK2   GOLDEN2-like 2 
 ath-m.4.str   GLK2   GOLDEN2-like 2 
 ath-m.4.tis   GLK2   GOLDEN2-like 2 
 ath-u.5   GPRI1   GBF's pro-rich region-interacting factor 1 
 gma-u.5   100790591   transcription activator GLK1 
 gma-u.5   100777595   transcription activator GLK1 
 gma-u.5   100775671   transcription activator GLK1 
 vvi-u.5   100260852   transcription activator GLK1 
 ppo-u.5   7469566   transcription activator GLK1 
 ppo-u.5   18106803   transcription activator GLK1 
 mtr-u.5   11444987   probable transcription factor GLK1 
 mtr-u.5   25487700   probable transcription factor GLK1 
 sly-u.5   GLK1   golden1-like protein 
 sly-u.5   GLK2   transcription factor GLK2 
 osa-u.5   4326363   probable transcription factor GLK2 
 osa-u.5   4340977   probable transcription factor GLK1 
 zma-u.5   541882   G2-like 1 
 zma-u.5   542493   golden plant 2 

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Top 50 coexpressed genes to GLK2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GLK2 (ath-u.5 coexpression data)

CoexMap"834442"


athGLK2 | Entrez gene ID : 834442      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 3 1 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1900056 [list] [network] negative regulation of leaf senescence  (22 genes)  IMP  
GO:0010380 [list] [network] regulation of chlorophyll biosynthetic process  (26 genes)  IGI  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IGI  
GO:0009658 [list] [network] chloroplast organization  (197 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IDA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001331906.1 [sequence] [blastp]
NP_199232.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cysk_nucl 2,  cyto 1  (predict for NP_001331906.1)
chlo 4,  nucl 4,  pero 1,  extr 1,  vacu 1,  cyto_pero 1  (predict for NP_199232.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001331906.1)
other 8  (predict for NP_199232.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
GLK2
ath-r.7
for
GLK2
ath-m.9
for
GLK2
ath-e.2
for
GLK2
ath-m.4.bio
for
GLK2
ath-m.4.hor
for
GLK2
ath-m.4.lig
for
GLK2
ath-m.4.str
for
GLK2
ath-m.4.tis
for
GLK2
ath-u.5
for
GPRI1
gma-u.5
for
100790591
gma-u.5
for
100777595
gma-u.5
for
100775671
vvi-u.5
for
100260852
ppo-u.5
for
7469566
ppo-u.5
for
18106803
mtr-u.5
for
11444987
mtr-u.5
for
25487700
sly-u.5
for
GLK1
sly-u.5
for
GLK2
osa-u.5
for
4326363
osa-u.5
for
4340977
zma-u.5
for
541882
zma-u.5
for
542493


Ortholog ID: 3078
Species ath ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol GLK2 GPRI1 LOC103842594 LOC103848864 LOC106368781 LOC106357550 LOC107898977 LOC107933038 LOC102618104 LOC100799248 LOC100790591 LOC100260852 LOC18106803 LOC7469566 LOC25487700 LOC11444987 GLK1 GLK2 LOC102587163 LOC102593464 LOC107807885 LOC107801247 LOC4326363 LOC4340977 LOC542493 LOC541882 LOC123077934 LOC123168849 LOC123411544 LOC123443300 LOC8057890 LOC8078076 LOC100821188 LOC100831717
Function* GOLDEN2-like 2 GBF's pro-rich region-interacting factor 1 transcription activator GLK1 transcription activator GLK2 transcription activator GLK1-like transcription activator GLK1-like transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 transcription activator GLK1 probable transcription factor GLK1 probable transcription factor GLK1 golden1-like protein transcription factor GLK2 transcription activator GLK1 transcription activator GLK1-like transcription activator GLK1 putative transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK1 golden plant 2 G2-like 1 probable transcription factor GLK2 probable transcription factor GLK1 probable transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK1 probable transcription factor GLK2 probable transcription factor GLK2 probable transcription factor GLK1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
bra00950 Isoquinoline alkaloid biosynthesis 2
bra00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 6
ghi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 3
gma00710 Carbon fixation by Calvin cycle 3
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00196 Photosynthesis - antenna proteins 3
sot00860 Porphyrin metabolism 3
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04148 Efferocytosis 2
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta00940 Phenylpropanoid biosynthesis 4
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 5
bdi00900 Terpenoid backbone biosynthesis 2
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834442 816579 103842594 103848864 106368781 106357550 107898977 107933038 102618104 100799248 100790591 100260852 18106803 7469566 25487700 11444987 101055587 101055613 102587163 102593464 107807885 107801247 4326363 4340977 542493 541882 123077934 123168849 123411544 123443300 8057890 8078076 100821188 100831717
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