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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-r.7   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.9   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-e.2   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.4.bio   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.4.hor   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.4.lig   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.4.str   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 ath-m.4.tis   APE2   Glucose-6-phosphate/phosphate translocator-like protein 
 bra-r.6   103853688   triose phosphate/phosphate translocator TPT, chloroplastic 
 bra-r.6   103827753   triose phosphate/phosphate translocator, chloroplastic 
 bna-r.1   106400986   triose phosphate/phosphate translocator, chloroplastic 
 bna-r.1   111208754   triose phosphate/phosphate translocator, chloroplastic 
 bna-r.1   106410600   triose phosphate/phosphate translocator TPT, chloroplastic 
 ghi-r.1   107903927   triose phosphate/phosphate translocator, chloroplastic 
 ghi-r.1   107925315   triose phosphate/phosphate translocator, chloroplastic 
 ghi-r.1   107941062   triose phosphate/phosphate translocator, chloroplastic 
 cit-r.1   102608563   triose phosphate/phosphate translocator, chloroplastic 
 cit-r.1   102630779   triose phosphate/phosphate translocator, chloroplastic-like 
 gma-u.5   732611   triose phosphate/phosphate translocator, chloroplastic 
 gma-u.5   100794336   triose phosphate/phosphate translocator, chloroplastic 
 vvi-u.5   100264496   triose phosphate/phosphate translocator, chloroplastic 
 vvi-u.5   100257292   triose phosphate/phosphate translocator, chloroplastic 
 vvi-u.5   100259322   triose phosphate/phosphate translocator, chloroplastic 
 ppo-u.5   7456262   triose phosphate/phosphate translocator TPT, chloroplastic 
 ppo-u.5   18103067   triose phosphate/phosphate translocator TPT, chloroplastic 
 mtr-u.5   25493090   triose phosphate/phosphate translocator, chloroplastic 
 mtr-u.5   11414021   triose phosphate/phosphate translocator, chloroplastic 
 sly-u.5   cTPT   triose phosphate/phosphate translocator, chloroplastic 
 sot-r.1   102585108   triose phosphate/phosphate translocator, chloroplastic-like 
 nta-r.1   107768892   triose phosphate/phosphate translocator, chloroplastic-like 
 nta-r.1   107824785   triose phosphate/phosphate translocator, chloroplastic 
 osa-u.5   4326365   triose phosphate/phosphate translocator TPT, chloroplastic-like 
 osa-u.5   4338191   triose phosphate/phosphate translocator TPT, chloroplastic-like 
 zma-u.5   100501361   Triose phosphate/phosphate translocator, chloroplastic 
 zma-u.5   542473   Triose phosphate/phosphate translocator TPT chloroplastic 
 zma-u.5   100273570   triose phosphate/phosphate translocator 
 tae-r.2   123060852   triose phosphate/phosphate translocator TPT, chloroplastic 
 tae-r.2   542868   triose phosphate/phosphate translocator TPT, chloroplastic 
 tae-r.2   123069440   triose phosphate/phosphate translocator TPT, chloroplastic 
 hvu-r.1   123443302   triose phosphate/phosphate translocator TPT, chloroplastic 
 hvu-r.1   123418547   triose phosphate/phosphate translocator TPT, chloroplastic-like 
 sbi-r.1   8058293   triose phosphate/phosphate translocator, chloroplastic 
 sbi-r.1   8078074   triose phosphate/phosphate translocator, chloroplastic 
 bdi-r.1   100836639   triose phosphate/phosphate translocator TPT, chloroplastic 
 bdi-r.1   100832234   triose phosphate/phosphate translocator TPT, chloroplastic 
 cre-r.1   CHLRE_01g045550v5   uncharacterized protein 

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Top 50 coexpressed genes to APE2 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to APE2 (ath-u.5 coexpression data)

CoexMap"834652"


athAPE2 | Entrez gene ID : 834652      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 2 3 2 2 1 1 2 2 3 3 2 2 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015717 [list] [network] triose phosphate transport  (4 genes)  IMP  
GO:0035436 [list] [network] triose phosphate transmembrane transport  (4 genes)  IDA  
GO:0015713 [list] [network] phosphoglycerate transmembrane transport  (6 genes)  IDA  
GO:0009643 [list] [network] photosynthetic acclimation  (11 genes)  IMP  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO MF
GO:0071917 [list] [network] triose-phosphate transmembrane transporter activity  (4 genes)  IDA IMP  
GO:0015120 [list] [network] phosphoglycerate transmembrane transporter activity  (6 genes)  IDA  
GO:0015297 [list] [network] antiporter activity  (91 genes)  ISS  
Protein NP_001032017.1 [sequence] [blastp]
NP_001078720.1 [sequence] [blastp]
NP_568655.2 [sequence] [blastp]
NP_851138.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2  (predict for NP_001032017.1)
chlo 7,  chlo_mito 5,  mito 2  (predict for NP_001078720.1)
chlo 6,  chlo_mito 4,  cyto 1,  vacu 1  (predict for NP_568655.2)
chlo 7,  chlo_mito 5,  mito 2  (predict for NP_851138.1)
Subcellular
localization
TargetP
mito 6,  chlo 3  (predict for NP_001032017.1)
mito 6,  chlo 3  (predict for NP_001078720.1)
scret 4  (predict for NP_568655.2)
mito 6,  chlo 3  (predict for NP_851138.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
APE2
ath-r.7
for
APE2
ath-m.9
for
APE2
ath-e.2
for
APE2
ath-m.4.bio
for
APE2
ath-m.4.hor
for
APE2
ath-m.4.lig
for
APE2
ath-m.4.str
for
APE2
ath-m.4.tis
for
APE2
bra-r.6
for
103853688
bra-r.6
for
103827753
bna-r.1
for
106400986
bna-r.1
for
111208754
bna-r.1
for
106410600
ghi-r.1
for
107903927
ghi-r.1
for
107925315
ghi-r.1
for
107941062
cit-r.1
for
102608563
cit-r.1
for
102630779
gma-u.5
for
732611
gma-u.5
for
100794336
vvi-u.5
for
100264496
vvi-u.5
for
100257292
vvi-u.5
for
100259322
ppo-u.5
for
7456262
ppo-u.5
for
18103067
mtr-u.5
for
25493090
mtr-u.5
for
11414021
sly-u.5
for
cTPT
sot-r.1
for
102585108
nta-r.1
for
107768892
nta-r.1
for
107824785
osa-u.5
for
4326365
osa-u.5
for
4338191
zma-u.5
for
100501361
zma-u.5
for
542473
zma-u.5
for
100273570
tae-r.2
for
123060852
tae-r.2
for
542868
tae-r.2
for
123069440
hvu-r.1
for
123443302
hvu-r.1
for
123418547
sbi-r.1
for
8058293
sbi-r.1
for
8078074
bdi-r.1
for
100836639
bdi-r.1
for
100832234
cre-r.1
for
CHLRE_01g045550v5


Ortholog ID: 3269
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi vvi ppo ppo mtr mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol APE2 LOC103853688 LOC103827753 LOC111208754 LOC106410600 LOC125588618 LOC107925315 LOC107960323 LOC107891774 LOC102608563 LOC102630779 LOC732611 LOC100794336 LOC100264496 LOC100257292 LOC100259322 LOC7456262 LOC18103067 LOC25493090 LOC11414021 cTPT LOC102585108 LOC107768892 LOC107824785 LOC4326365 LOC4338191 LOC100501361 LOC542473 LOC100273570 LOC123069440 LOC123180318 LOC123110489 LOC123443302 LOC123418547 LOC8058293 LOC8078074 LOC100836639 LOC100832234 CHLRE_01g045550v5
Function* Glucose-6-phosphate/phosphate translocator-like protein triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic-like triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic-like triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic-like triose phosphate/phosphate translocator, chloroplastic-like triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic-like triose phosphate/phosphate translocator TPT, chloroplastic-like Triose phosphate/phosphate translocator, chloroplastic Triose phosphate/phosphate translocator TPT chloroplastic triose phosphate/phosphate translocator triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic-like triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic triose phosphate/phosphate translocator TPT, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 6
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
bra00196 Photosynthesis - antenna proteins 3
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00190 Oxidative phosphorylation 3
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 3
ghi00020 Citrate cycle (TCA cycle) 2
ghi00480 Glutathione metabolism 2
ghi01200 Carbon metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 5
gma01200 Carbon metabolism 5
gma00010 Glycolysis / Gluconeogenesis 3
gma00195 Photosynthesis 3
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 11
gma01200 Carbon metabolism 11
gma00030 Pentose phosphate pathway 4
gma00010 Glycolysis / Gluconeogenesis 3
gma00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
vvi01200 Carbon metabolism 4
vvi00710 Carbon fixation by Calvin cycle 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 7
ppo00196 Photosynthesis - antenna proteins 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo00195 Photosynthesis 3
ppo00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 5
mtr01200 Carbon metabolism 3
mtr00195 Photosynthesis 2
mtr00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00730 Thiamine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 9
osa00710 Carbon fixation by Calvin cycle 7
osa00630 Glyoxylate and dicarboxylate metabolism 4
osa01230 Biosynthesis of amino acids 3
osa00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00710 Carbon fixation by Calvin cycle 4
zma01200 Carbon metabolism 4
zma00010 Glycolysis / Gluconeogenesis 3
zma04626 Plant-pathogen interaction 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
zma00620 Pyruvate metabolism 2
zma00710 Carbon fixation by Calvin cycle 2
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma03013 Nucleocytoplasmic transport 4
zma04120 Ubiquitin mediated proteolysis 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 3
tae04981 Folate transport and metabolism 3
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00195 Photosynthesis 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 5
hvu00260 Glycine, serine and threonine metabolism 3
hvu00630 Glyoxylate and dicarboxylate metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi00196 Photosynthesis - antenna proteins 3
sbi00195 Photosynthesis 2
sbi00860 Porphyrin metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 3
bdi01230 Biosynthesis of amino acids 3
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 8
cre00220 Arginine biosynthesis 4
cre01200 Carbon metabolism 4
cre01210 2-Oxocarboxylic acid metabolism 4
cre00010 Glycolysis / Gluconeogenesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834652 103853688 103827753 111208754 106410600 125588618 107925315 107960323 107891774 102608563 102630779 732611 100794336 100264496 100257292 100259322 7456262 18103067 25493090 11414021 101249306 102585108 107768892 107824785 4326365 4338191 100501361 542473 100273570 123069440 123180318 123110489 123443302 123418547 8058293 8078074 100836639 100832234 5715664
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