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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-r.7   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.9   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-e.2   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.4.bio   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.4.hor   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.4.lig   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.4.str   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-m.4.tis   AT5G49430   WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein 
 ath-u.5   AT2G47410   WD40 domain-containing protein 
 gma-u.5   100819598   PH-interacting protein 
 gma-u.5   100818665   PH-interacting protein 
 gma-u.5   100796497   bromodomain and WD repeat-containing protein 3 
 vvi-u.5   100248159   uncharacterized LOC100248159 
 vvi-u.5   100248563   uncharacterized LOC100248563 
 ppo-u.5   7491256   uncharacterized LOC7491256 
 ppo-u.5   18102606   uncharacterized LOC18102606 
 mtr-u.5   11414887   bromodomain and WD repeat-containing protein 3 
 mtr-u.5   11416840   PH-interacting protein 
 sly-u.5   101244028   uncharacterized LOC101244028 
 sly-u.5   101243927   uncharacterized LOC101243927 
 osa-u.5   9268022   uncharacterized LOC9268022 
 zma-u.5   103634840   bromodomain and WD repeat-containing protein 3 

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Top 50 coexpressed genes to AT5G49430 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G49430 (ath-u.5 coexpression data)

CoexMap"835003"


athAT5G49430 | Entrez gene ID : 835003      
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 10 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (121 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001318768.1 [sequence] [blastp]
NP_199754.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cysk 2,  chlo 1,  cyto 1,  mito 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_001318768.1)
nucl 4,  cysk 2,  chlo 1,  cyto 1,  mito 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_199754.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001318768.1)
other 6  (predict for NP_199754.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G49430

.
ath-r.7
for
AT5G49430

.
ath-m.9
for
AT5G49430

.
ath-e.2
for
AT5G49430

.
ath-m.4.bio
for
AT5G49430

.
ath-m.4.hor
for
AT5G49430

.
ath-m.4.lig
for
AT5G49430

.
ath-m.4.str
for
AT5G49430

.
ath-m.4.tis
for
AT5G49430

.
ath-u.5
for
AT2G47410

.
gma-u.5
for
100819598

.
gma-u.5
for
100818665

.
gma-u.5
for
100796497

.
vvi-u.5
for
100248159

.
vvi-u.5
for
100248563

.
ppo-u.5
for
7491256

.
ppo-u.5
for
18102606

.
mtr-u.5
for
11414887

.
mtr-u.5
for
11416840

.
sly-u.5
for
101244028

.
sly-u.5
for
101243927

.
osa-u.5
for
9268022

.
zma-u.5
for
103634840

.


Ortholog ID: 3789
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sot sot cit cit bdi nta nta
Symbol AT2G47410 AT5G49430 LOC100796497 LOC100819598 LOC101243927 LOC101244028 LOC9268022 LOC103634840 LOC103854602 LOC103874623 LOC100248159 LOC100248563 LOC18102606 LOC11416840 LOC11414887 LOC123119126 LOC123102004 LOC123395698 LOC123450584 LOC107888953 LOC107909993 LOC106348808 LOC106392330 CHLRE_02g078150v5 CHLRE_02g078251v5 LOC8056581 LOC102601289 LOC102601826 LOC102622617 LOC102628602 LOC100838154 LOC107802938 LOC107805045
Function* WD40 domain-containing protein WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein bromodomain and WD repeat-containing protein 3 PH-interacting protein uncharacterized LOC101243927 uncharacterized LOC101244028 uncharacterized LOC9268022 bromodomain and WD repeat-containing protein 3 bromodomain and WD repeat-containing protein 3 bromodomain and WD repeat-containing protein 1 uncharacterized LOC100248159 uncharacterized LOC100248563 uncharacterized LOC18102606 PH-interacting protein bromodomain and WD repeat-containing protein 3 PH-interacting protein PH-interacting protein bromodomain and WD repeat-containing protein 3 uncharacterized LOC123450584 bromodomain and WD repeat-containing protein 1 PH-interacting protein bromodomain and WD repeat-containing protein 1 PH-interacting protein-like uncharacterized protein uncharacterized protein bromodomain and WD repeat-containing protein 1 bromodomain and WD repeat-containing protein 1 PH-interacting protein uncharacterized LOC102622617 uncharacterized LOC102628602 bromodomain and WD repeat-containing DDB_G0285837 uncharacterized LOC107802938 uncharacterized LOC107805045
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
gma02010 ABC transporters 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03040 Spliceosome 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03040 Spliceosome 2
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03022 Basal transcription factors 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04712 Circadian rhythm - plant 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819354 835003 100796497 100819598 101243927 101244028 9268022 103634840 103854602 103874623 100248159 100248563 18102606 11416840 11414887 123119126 123102004 123395698 123450584 107888953 107909993 106348808 106392330 5727247 66052239 8056581 102601289 102601826 102622617 102628602 100838154 107802938 107805045
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