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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   WR3   nitrate transmembrane transporter 
 ath-r.7   WR3   nitrate transmembrane transporter 
 ath-m.9   WR3   nitrate transmembrane transporter 
 ath-e.2   WR3   nitrate transmembrane transporter 
 ath-m.4.bio   WR3   nitrate transmembrane transporter 
 ath-m.4.hor   WR3   nitrate transmembrane transporter 
 ath-m.4.lig   WR3   nitrate transmembrane transporter 
 ath-m.4.str   WR3   nitrate transmembrane transporter 
 ath-m.4.tis   WR3   nitrate transmembrane transporter 
 bra-r.6   103874009   high-affinity nitrate transporter 3.1 
 bra-r.6   103852198   high-affinity nitrate transporter 3.1 
 bra-r.6   103858437   high-affinity nitrate transporter 3.1 
 bna-r.1   106414455   high-affinity nitrate transporter 3.1 
 bna-r.1   106421460   high-affinity nitrate transporter 3.1 
 bna-r.1   106351468   high-affinity nitrate transporter 3.1 
 ghi-r.1   107953370   high-affinity nitrate transporter 3.2 
 ghi-r.1   107949732   high-affinity nitrate transporter 3.2 
 ghi-r.1   107926608   high-affinity nitrate transporter 3.2 
 cit-r.1   102626691   high-affinity nitrate transporter 3.1 
 gma-u.5   100802333   high-affinity nitrate transporter 3.1 
 gma-u.5   100794996   high-affinity nitrate transporter 3.1 
 vvi-u.5   100258771   high-affinity nitrate transporter 3.1 
 ppo-u.5   7484430   high-affinity nitrate transporter 3.1 
 ppo-u.5   7453807   high-affinity nitrate transporter 3.1 
 mtr-u.5   25493701   high-affinity nitrate transporter 3.1 
 mtr-u.5   25493699   high-affinity nitrate transporter 3.1 
 sly-u.5   101245833   high-affinity nitrate transporter 3.2 
 sot-r.1   102587794   high-affinity nitrate transporter 3.2-like 
 sot-r.1   102587134   high-affinity nitrate transporter 3.1 
 nta-r.1   107770078   high-affinity nitrate transporter 3.1-like 
 nta-r.1   107804243   high-affinity nitrate transporter 3.2-like 
 nta-r.1   107817198   high-affinity nitrate transporter 3.1 
 osa-u.5   4329861   high-affinity nitrate transporter-activating protein 2.1 
 osa-u.5   4336175   probable high-affinity nitrate transporter-activating protein 2.2 
 zma-u.5   778437   high affinity nitrate transporter 
 zma-u.5   778428   high affinity nitrate transporter 
 tae-r.2   123114084   high-affinity nitrate transporter-activating protein 2.1 
 tae-r.2   123082828   high-affinity nitrate transporter-activating protein 2.1 
 hvu-r.1   123402959   probable high-affinity nitrate transporter-activating protein 2.2 
 hvu-r.1   123453143   high-affinity nitrate transporter-activating protein 2.1-like 
 hvu-r.1   123402346   probable high-affinity nitrate transporter-activating protein 2.2 
 sbi-r.1   8070606   high-affinity nitrate transporter-activating protein 2.1 
 sbi-r.1   8073590   probable high-affinity nitrate transporter-activating protein 2.2 
 bdi-r.1   100831058   high-affinity nitrate transporter-activating protein 2.1 
 cre-r.1   CHLRE_09g410900v5   uncharacterized protein 

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Top 50 coexpressed genes to WR3 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to WR3 (ath-u.5 coexpression data)

CoexMap"835085"


athWR3 | Entrez gene ID : 835085      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 2 1 2 2 1 2 3 2 2 2 3 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0015706 [list] [network] nitrate transmembrane transport  (22 genes)  IMP  
GO:0010167 [list] [network] response to nitrate  (31 genes)  IEP  
GO:0009611 [list] [network] response to wounding  (271 genes)  IEP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0015112 [list] [network] nitrate transmembrane transporter activity  (25 genes)  IMP  
Protein NP_199831.1 [sequence] [blastp]
NP_851159.1 [sequence] [blastp]
NP_851160.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  extr 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_199831.1)
plas 4,  vacu 3,  extr 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_851159.1)
plas 4,  vacu 3,  extr 2,  nucl_plas 2,  cysk_plas 2,  E.R._plas 2,  mito_plas 2,  cyto_plas 2  (predict for NP_851160.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_199831.1)
scret 9  (predict for NP_851159.1)
scret 9  (predict for NP_851160.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
WR3
ath-r.7
for
WR3
ath-m.9
for
WR3
ath-e.2
for
WR3
ath-m.4.bio
for
WR3
ath-m.4.hor
for
WR3
ath-m.4.lig
for
WR3
ath-m.4.str
for
WR3
ath-m.4.tis
for
WR3
bra-r.6
for
103874009
bra-r.6
for
103852198
bra-r.6
for
103858437
bna-r.1
for
106414455
bna-r.1
for
106421460
bna-r.1
for
106351468
ghi-r.1
for
107953370
ghi-r.1
for
107949732
ghi-r.1
for
107926608
cit-r.1
for
102626691
gma-u.5
for
100802333
gma-u.5
for
100794996
vvi-u.5
for
100258771
ppo-u.5
for
7484430
ppo-u.5
for
7453807
mtr-u.5
for
25493701
mtr-u.5
for
25493699
sly-u.5
for
101245833
sot-r.1
for
102587794
sot-r.1
for
102587134
nta-r.1
for
107770078
nta-r.1
for
107804243
nta-r.1
for
107817198
osa-u.5
for
4329861
osa-u.5
for
4336175
zma-u.5
for
778437
zma-u.5
for
778428
tae-r.2
for
123114084
tae-r.2
for
123082828
hvu-r.1
for
123402959
hvu-r.1
for
123453143
hvu-r.1
for
123402346
sbi-r.1
for
8070606
sbi-r.1
for
8073590
bdi-r.1
for
100831058
cre-r.1
for
CHLRE_09g410900v5


Ortholog ID: 2760
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu hvu sbi sbi bdi cre
Symbol WR3 LOC103852198 LOC103858437 LOC103843870 LOC106374441 LOC106388483 LOC106442269 LOC107953370 LOC107949732 LOC107926608 LOC102626691 LOC100802333 LOC100794996 LOC100258771 LOC7484430 LOC7453807 LOC25493701 LOC25493699 LOC101245833 LOC102587794 LOC102587134 LOC107770078 LOC107804243 LOC107817198 LOC4329861 LOC4336175 LOC778437 LOC778428 LOC123130648 LOC123130649 LOC123137334 LOC123402959 LOC123453143 LOC123402346 LOC8070606 LOC8073590 LOC100831058 CHLRE_09g410900v5
Function* nitrate transmembrane transporter high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1-like high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.2-like high-affinity nitrate transporter 3.2 high-affinity nitrate transporter 3.2 high-affinity nitrate transporter 3.2 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.2 high-affinity nitrate transporter 3.2-like high-affinity nitrate transporter 3.1 high-affinity nitrate transporter 3.1-like high-affinity nitrate transporter 3.2-like high-affinity nitrate transporter 3.1 high-affinity nitrate transporter-activating protein 2.1 probable high-affinity nitrate transporter-activating protein 2.2 high affinity nitrate transporter high affinity nitrate transporter probable high-affinity nitrate transporter-activating protein 2.2 probable high-affinity nitrate transporter-activating protein 2.2 high-affinity nitrate transporter-activating protein 2.1 probable high-affinity nitrate transporter-activating protein 2.2 high-affinity nitrate transporter-activating protein 2.1-like probable high-affinity nitrate transporter-activating protein 2.2 high-affinity nitrate transporter-activating protein 2.1 probable high-affinity nitrate transporter-activating protein 2.2 high-affinity nitrate transporter-activating protein 2.1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
bra00052 Galactose metabolism 2
bra00500 Starch and sucrose metabolism 2
bra04016 MAPK signaling pathway - plant 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00052 Galactose metabolism 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00910 Nitrogen metabolism 2
gma01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00910 Nitrogen metabolism 3
vvi01310 Nitrogen cycle 2
vvi00030 Pentose phosphate pathway 2
vvi00480 Glutathione metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 4
ppo00030 Pentose phosphate pathway 3
ppo00480 Glutathione metabolism 3
ppo00195 Photosynthesis 3
ppo00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 5
ppo01310 Nitrogen cycle 3
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr04016 MAPK signaling pathway - plant 3
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta00220 Arginine biosynthesis 5
nta00250 Alanine, aspartate and glutamate metabolism 5
nta00910 Nitrogen metabolism 5
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 4
nta00250 Alanine, aspartate and glutamate metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00910 Nitrogen metabolism 4
nta01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 4
tae04075 Plant hormone signal transduction 4
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00910 Nitrogen metabolism 4
cre00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835085 103852198 103858437 103843870 106374441 106388483 106442269 107953370 107949732 107926608 102626691 100802333 100794996 100258771 7484430 7453807 25493701 25493699 101245833 102587794 102587134 107770078 107804243 107817198 4329861 4336175 778437 778428 123130648 123130649 123137334 123402959 123453143 123402346 8070606 8073590 100831058 5722284
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