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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G51960   complex 1 protein, LYR family protein 
 ath-r.7   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.9   AT5G51960   complex 1 protein, LYR family protein 
 ath-e.2   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.4.bio   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.4.hor   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.4.lig   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.4.str   AT5G51960   complex 1 protein, LYR family protein 
 ath-m.4.tis   AT5G51960   complex 1 protein, LYR family protein 
 bra-r.6   103852119   uncharacterized LOC103852119 
 bra-r.6   103832672   uncharacterized LOC103832672 
 bna-r.1   106379310   uncharacterized LOC106379310 
 bna-r.1   106413786   uncharacterized LOC106413786 
 bna-r.1   106436843   uncharacterized LOC106436843 
 ghi-r.1   107921198   uncharacterized LOC107921198 
 ghi-r.1   107930633   uncharacterized LOC107930633 
 cit-r.1   102623192   hypothetical protein 
 gma-u.5   100803307   uncharacterized LOC100803307 
 gma-u.5   100500324   uncharacterized LOC100500324 
 vvi-u.5   100253091   uncharacterized LOC100253091 
 ppo-u.5   7469766   uncharacterized LOC7469766 
 mtr-u.5   11414057   uncharacterized LOC11414057 
 sly-u.5   101247734   uncharacterized LOC101247734 
 sot-r.1   102602216   uncharacterized LOC102602216 
 nta-r.1   107786327   uncharacterized LOC107786327 
 nta-r.1   107799351   uncharacterized LOC107799351 
 osa-u.5   4349696   uncharacterized LOC4349696 
 zma-u.5   100279036   uncharacterized LOC100279036 
 zma-u.5   100276333   uncharacterized LOC100276333 
 tae-r.2   123111266   uncharacterized LOC123111266 
 tae-r.2   123103098   uncharacterized LOC123103098 
 tae-r.2   123120448   uncharacterized LOC123120448 
 hvu-r.1   123398114   uncharacterized LOC123398114 
 sbi-r.1   8071427   uncharacterized LOC8071427 
 bdi-r.1   100824328   uncharacterized LOC100824328 
 cre-r.1   CHLRE_03g171500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G51960 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G51960 (ath-u.5 coexpression data)

CoexMap"835271"


athAT5G51960 | Entrez gene ID : 835271      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function complex 1 protein, LYR family protein
KEGG
GO BP
GO CC
GO MF
Protein NP_001331290.1 [sequence] [blastp]
NP_200009.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 2  (predict for NP_001331290.1)
cyto 7,  chlo 2  (predict for NP_200009.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001331290.1)
other 6,  mito 3  (predict for NP_200009.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G51960
ath-r.7
for
AT5G51960
ath-m.9
for
AT5G51960
ath-e.2
for
AT5G51960
ath-m.4.bio
for
AT5G51960
ath-m.4.hor
for
AT5G51960
ath-m.4.lig
for
AT5G51960
ath-m.4.str
for
AT5G51960
ath-m.4.tis
for
AT5G51960
bra-r.6
for
103852119
bra-r.6
for
103832672
bna-r.1
for
106379310
bna-r.1
for
106413786
bna-r.1
for
106436843
ghi-r.1
for
107921198
ghi-r.1
for
107930633
cit-r.1
for
102623192
gma-u.5
for
100803307
gma-u.5
for
100500324
vvi-u.5
for
100253091
ppo-u.5
for
7469766
mtr-u.5
for
11414057
sly-u.5
for
101247734
sot-r.1
for
102602216
nta-r.1
for
107786327
nta-r.1
for
107799351
osa-u.5
for
4349696
zma-u.5
for
100279036
zma-u.5
for
100276333
tae-r.2
for
123111266
tae-r.2
for
123103098
tae-r.2
for
123120448
hvu-r.1
for
123398114
sbi-r.1
for
8071427
bdi-r.1
for
100824328
cre-r.1
for
CHLRE_03g171500v5


Ortholog ID: 8194
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT5G51960 LOC103852119 LOC103832672 LOC106379310 LOC106413786 LOC106436843 LOC107921198 LOC107930633 LOC102623192 LOC100803307 LOC100500324 LOC100253091 LOC7469766 LOC11414057 LOC101247734 LOC102602216 LOC107786327 LOC107799351 LOC4349696 LOC100279036 LOC100276333 LOC123111266 LOC123103098 LOC123120448 LOC123398114 LOC8071427 LOC100824328 CHLRE_03g171500v5
Function* complex 1 protein, LYR family protein uncharacterized LOC103852119 uncharacterized LOC103832672 uncharacterized LOC106379310 uncharacterized LOC106413786 uncharacterized LOC106436843 uncharacterized LOC107921198 uncharacterized LOC107930633 hypothetical protein uncharacterized LOC100803307 uncharacterized LOC100500324 uncharacterized LOC100253091 uncharacterized LOC7469766 uncharacterized LOC11414057 uncharacterized LOC101247734 uncharacterized LOC102602216 uncharacterized LOC107786327 uncharacterized LOC107799351 uncharacterized LOC4349696 uncharacterized LOC100279036 uncharacterized LOC100276333 uncharacterized LOC123111266 uncharacterized LOC123103098 uncharacterized LOC123120448 uncharacterized LOC123398114 uncharacterized LOC8071427 uncharacterized LOC100824328 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma00260 Glycine, serine and threonine metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835271 103852119 103832672 106379310 106413786 106436843 107921198 107930633 102623192 100803307 100500324 100253091 7469766 11414057 101247734 102602216 107786327 107799351 4349696 100279036 100276333 123111266 123103098 123120448 123398114 8071427 100824328 5728928
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