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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G54850   hexon 
 ath-r.7   AT5G54850   hexon 
 ath-m.9   AT5G54850   hexon 
 ath-e.2   AT5G54850   hexon 
 ath-m.4.bio   AT5G54850   hexon 
 ath-m.4.hor   AT5G54850   hexon 
 ath-m.4.lig   AT5G54850   hexon 
 ath-m.4.str   AT5G54850   hexon 
 ath-m.4.tis   AT5G54850   hexon 
 bra-r.6   103844936   uncharacterized LOC103844936 
 bna-r.1   106371235   uncharacterized LOC106371235 
 bna-r.1   BNAC09G31360D   uncharacterized BNAC09G31360D 
 ghi-r.1   107903348   uncharacterized LOC107903348 
 ghi-r.1   107930442   uncharacterized LOC107930442 
 cit-r.1   102616476   hypothetical protein 
 gma-u.5   100809375   uncharacterized LOC100809375 
 gma-u.5   100788941   uncharacterized LOC100788941 
 vvi-u.5   104880886   uncharacterized LOC104880886 
 ppo-u.5   18095940   uncharacterized LOC18095940 
 mtr-u.5   11433524   uncharacterized LOC11433524 
 sly-u.5   101252125   uncharacterized LOC101252125 
 sot-r.1   102590120   uncharacterized LOC102590120 
 sot-r.1   102581297   uncharacterized LOC102581297 
 nta-r.1   107829843   uncharacterized LOC107829843 
 nta-r.1   107803350   uncharacterized LOC107803350 
 nta-r.1   107760098   uncharacterized LOC107760098 
 osa-u.5   4343401   uncharacterized LOC4343401 
 zma-u.5   100277924   uncharacterized LOC100277924 
 zma-u.5   100278113   uncharacterized LOC100278113 
 tae-r.2   123188418   uncharacterized LOC123188418 
 tae-r.2   123052539   uncharacterized LOC123052539 
 tae-r.2   123044665   uncharacterized LOC123044665 
 hvu-r.1   123425862   uncharacterized LOC123425862 
 sbi-r.1   8084052   uncharacterized LOC8084052 
 bdi-r.1   100831688   uncharacterized LOC100831688 

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Top 50 coexpressed genes to AT5G54850 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G54850 (ath-u.5 coexpression data)

CoexMap"835575"


athAT5G54850 | Entrez gene ID : 835575      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function hexon
KEGG
GO BP
GO CC
GO MF
Protein NP_200296.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_200296.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_200296.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G54850
ath-r.7
for
AT5G54850
ath-m.9
for
AT5G54850
ath-e.2
for
AT5G54850
ath-m.4.bio
for
AT5G54850
ath-m.4.hor
for
AT5G54850
ath-m.4.lig
for
AT5G54850
ath-m.4.str
for
AT5G54850
ath-m.4.tis
for
AT5G54850
bra-r.6
for
103844936
bna-r.1
for
106371235
bna-r.1
for
BNAC09G31360D
ghi-r.1
for
107903348
ghi-r.1
for
107930442
cit-r.1
for
102616476
gma-u.5
for
100809375
gma-u.5
for
100788941
vvi-u.5
for
104880886
ppo-u.5
for
18095940
mtr-u.5
for
11433524
sly-u.5
for
101252125
sot-r.1
for
102590120
sot-r.1
for
102581297
nta-r.1
for
107829843
nta-r.1
for
107803350
nta-r.1
for
107760098
osa-u.5
for
4343401
zma-u.5
for
100277924
zma-u.5
for
100278113
tae-r.2
for
123188418
tae-r.2
for
123052539
tae-r.2
for
123044665
hvu-r.1
for
123425862
sbi-r.1
for
8084052
bdi-r.1
for
100831688


Ortholog ID: 7761
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol AT5G54850 LOC103844936 LOC106371235 BNAC09G31360D LOC107930442 LOC107916585 LOC102616476 LOC100809375 LOC100788941 LOC104880886 LOC18095940 LOC11433524 LOC101252125 LOC102590120 LOC102581297 LOC107829843 LOC107803350 LOC107760098 LOC4343401 LOC100277924 LOC100278113 LOC123188418 LOC123052539 LOC123044665 LOC123425862 LOC8084052 LOC100831688
Function* hexon uncharacterized LOC103844936 uncharacterized LOC106371235 uncharacterized BNAC09G31360D uncharacterized LOC107930442 uncharacterized LOC107916585 hypothetical protein uncharacterized LOC100809375 uncharacterized LOC100788941 uncharacterized LOC104880886 uncharacterized LOC18095940 uncharacterized LOC11433524 uncharacterized LOC101252125 uncharacterized LOC102590120 uncharacterized LOC102581297 uncharacterized LOC107829843 uncharacterized LOC107803350 uncharacterized LOC107760098 uncharacterized LOC4343401 uncharacterized LOC100277924 uncharacterized LOC100278113 uncharacterized LOC123188418 uncharacterized LOC123052539 uncharacterized LOC123044665 uncharacterized LOC123425862 uncharacterized LOC8084052 uncharacterized LOC100831688
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04626 Plant-pathogen interaction 2
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00051 Fructose and mannose metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 4
mtr03060 Protein export 3
mtr04145 Phagosome 3
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04517 IgSF CAM signaling 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04136 Autophagy - other 4
nta04382 Cornified envelope formation 4
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04517 IgSF CAM signaling 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04517 IgSF CAM signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00010 Glycolysis / Gluconeogenesis 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835575 103844936 106371235 106390560 107930442 107916585 102616476 100809375 100788941 104880886 18095940 11433524 101252125 102590120 102581297 107829843 107803350 107760098 4343401 100277924 100278113 123188418 123052539 123044665 123425862 8084052 100831688
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