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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G54930   AT hook motif-containing protein 
 ath-r.7   AT5G54930   AT hook motif-containing protein 
 ath-m.9   AT5G54930   AT hook motif-containing protein 
 ath-e.2   AT5G54930   AT hook motif-containing protein 
 ath-m.4.bio   AT5G54930   AT hook motif-containing protein 
 ath-m.4.hor   AT5G54930   AT hook motif-containing protein 
 ath-m.4.lig   AT5G54930   AT hook motif-containing protein 
 ath-m.4.str   AT5G54930   AT hook motif-containing protein 
 ath-m.4.tis   AT5G54930   AT hook motif-containing protein 
 bra-r.6   103857018   uncharacterized LOC103857018 
 bra-r.6   103844943   uncharacterized LOC103844943 
 bna-r.1   125579157   uncharacterized LOC125579157 
 bna-r.1   106371231   uncharacterized LOC106371231 
 bna-r.1   106351076   uncharacterized LOC106351076 
 ghi-r.1   107919831   uncharacterized LOC107919831 
 cit-r.1   102618423   protein METABOLIC NETWORK MODULATOR 1 
 gma-u.5   100783413   uncharacterized LOC100783413 
 vvi-u.5   100257339   protein METABOLIC NETWORK MODULATOR 1 
 ppo-u.5   7470954   protein METABOLIC NETWORK MODULATOR 1 
 ppo-u.5   18095973   protein METABOLIC NETWORK MODULATOR 1 
 mtr-u.5   11428253   uncharacterized LOC11428253 
 sly-u.5   101249564   protein METABOLIC NETWORK MODULATOR 1 
 sly-u.5   101259217   protein METABOLIC NETWORK MODULATOR 1 
 sot-r.1   102597212   uncharacterized LOC102597212 
 sot-r.1   102582620   uncharacterized LOC102582620 
 nta-r.1   107796120   protein METABOLIC NETWORK MODULATOR 1 
 nta-r.1   107825985   protein METABOLIC NETWORK MODULATOR 1 
 nta-r.1   107829220   protein METABOLIC NETWORK MODULATOR 1-like 

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Top 50 coexpressed genes to AT5G54930 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G54930 (ath-u.5 coexpression data)

CoexMap"835584"


athAT5G54930 | Entrez gene ID : 835584      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 9 2 3 1 1 1 1 2 1 2 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000028 [list] [network] regulation of photoperiodism, flowering  (101 genes)  IMP  
GO:0044238 [list] [network] primary metabolic process  (4861 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
Protein NP_001032075.1 [sequence] [blastp]
NP_568817.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  plas 1  (predict for NP_001032075.1)
nucl 9,  chlo 1,  plas 1  (predict for NP_568817.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_001032075.1)
other 7,  chlo 5  (predict for NP_568817.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G54930
ath-r.7
for
AT5G54930
ath-m.9
for
AT5G54930
ath-e.2
for
AT5G54930
ath-m.4.bio
for
AT5G54930
ath-m.4.hor
for
AT5G54930
ath-m.4.lig
for
AT5G54930
ath-m.4.str
for
AT5G54930
ath-m.4.tis
for
AT5G54930
bra-r.6
for
103857018
bra-r.6
for
103844943
bna-r.1
for
125579157
bna-r.1
for
106371231
bna-r.1
for
106351076
ghi-r.1
for
107919831
cit-r.1
for
102618423
gma-u.5
for
100783413
vvi-u.5
for
100257339
ppo-u.5
for
7470954
ppo-u.5
for
18095973
mtr-u.5
for
11428253
sly-u.5
for
101249564
sly-u.5
for
101259217
sot-r.1
for
102597212
sot-r.1
for
102582620
nta-r.1
for
107796120
nta-r.1
for
107825985
nta-r.1
for
107829220


Ortholog ID: 11446
Species ath bra bra bna bna bna ghi cit gma vvi ppo ppo mtr sly sly sot sot nta nta nta
Symbol AT5G54930 LOC103857018 LOC103844943 LOC125579157 LOC106371231 LOC106347314 LOC107919831 LOC102618423 LOC100783413 LOC100257339 LOC7470954 LOC18095973 LOC11428253 LOC101249564 LOC101259217 LOC102597212 LOC102582620 LOC107796120 LOC107825985 LOC107831079
Function* AT hook motif-containing protein uncharacterized LOC103857018 uncharacterized LOC103844943 uncharacterized LOC125579157 uncharacterized LOC106371231 uncharacterized LOC106347314 uncharacterized LOC107919831 protein METABOLIC NETWORK MODULATOR 1 uncharacterized LOC100783413 protein METABOLIC NETWORK MODULATOR 1 protein METABOLIC NETWORK MODULATOR 1 protein METABOLIC NETWORK MODULATOR 1 uncharacterized LOC11428253 protein METABOLIC NETWORK MODULATOR 1 protein METABOLIC NETWORK MODULATOR 1 uncharacterized LOC102597212 uncharacterized LOC102582620 protein METABOLIC NETWORK MODULATOR 1 protein METABOLIC NETWORK MODULATOR 1 uncharacterized LOC107831079
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
bna03250 Viral life cycle - HIV-1 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
bna03250 Viral life cycle - HIV-1 4
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00561 Glycerolipid metabolism 2
ppo00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 5
nta04136 Autophagy - other 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835584 103857018 103844943 125579157 106371231 106347314 107919831 102618423 100783413 100257339 7470954 18095973 11428253 101249564 101259217 102597212 102582620 107796120 107825985 107831079
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