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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G58610   PHD finger transcription factor 
 ath-r.7   AT5G58610   PHD finger transcription factor 
 ath-m.9   AT5G58610   PHD finger transcription factor 
 ath-e.2   AT5G58610   PHD finger transcription factor 
 ath-m.4.bio   AT5G58610   PHD finger transcription factor 
 ath-m.4.hor   AT5G58610   PHD finger transcription factor 
 ath-m.4.lig   AT5G58610   PHD finger transcription factor 
 ath-m.4.str   AT5G58610   PHD finger transcription factor 
 ath-m.4.tis   AT5G58610   PHD finger transcription factor 
 gma-u.5   100806062   uncharacterized LOC100806062 
 gma-u.5   100818931   uncharacterized LOC100818931 
 mtr-u.5   25490920   uncharacterized LOC25490920 
 sly-u.5   101264968   uncharacterized LOC101264968 
 sly-u.5   101245266   uncharacterized LOC101245266 
 sly-u.5   101267496   increased DNA methylation 1-like 
 zma-u.5   100384354   uncharacterized LOC100384354 

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Top 50 coexpressed genes to AT5G58610 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G58610 (ath-u.5 coexpression data)

CoexMap"835975"


athAT5G58610 | Entrez gene ID : 835975      
Species ath gma mtr sly zma tae osa hvu ghi bdi cit vvi bra cre sbi ppo bna nta sot
Paralog 9 2 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (209 genes)  IEA  
Protein NP_001330111.1 [sequence] [blastp]
NP_001330112.1 [sequence] [blastp]
NP_001330113.1 [sequence] [blastp]
NP_001330114.1 [sequence] [blastp]
NP_001330115.1 [sequence] [blastp]
NP_001330116.1 [sequence] [blastp]
NP_001330117.1 [sequence] [blastp]
NP_001330118.1 [sequence] [blastp]
NP_001330119.1 [sequence] [blastp]
NP_001330120.1 [sequence] [blastp]
NP_200669.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330111.1)
nucl 7,  cyto 2  (predict for NP_001330112.1)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001330113.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001330114.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330115.1)
nucl 5,  chlo 3,  cyto 1,  chlo_mito 1  (predict for NP_001330116.1)
nucl 6,  cyto 2,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330117.1)
nucl 4,  chlo 4,  cyto 1  (predict for NP_001330118.1)
nucl 5,  cyto 2,  chlo 1,  cyto_pero 1  (predict for NP_001330119.1)
nucl 5,  cyto 4,  plas 1,  cysk 1,  cysk_plas 1  (predict for NP_001330120.1)
nucl 5,  cyto 2,  chlo 1,  cyto_pero 1  (predict for NP_200669.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001330111.1)
other 8  (predict for NP_001330112.1)
scret 6,  mito 3  (predict for NP_001330113.1)
scret 6,  mito 3  (predict for NP_001330114.1)
other 8,  chlo 3  (predict for NP_001330115.1)
scret 6,  mito 3  (predict for NP_001330116.1)
other 8,  chlo 3  (predict for NP_001330117.1)
scret 6,  mito 3  (predict for NP_001330118.1)
scret 6,  mito 3  (predict for NP_001330119.1)
other 8,  chlo 3  (predict for NP_001330120.1)
scret 6,  mito 3  (predict for NP_200669.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G58610

.
ath-r.7
for
AT5G58610

.
ath-m.9
for
AT5G58610

.
ath-e.2
for
AT5G58610

.
ath-m.4.bio
for
AT5G58610

.
ath-m.4.hor
for
AT5G58610

.
ath-m.4.lig
for
AT5G58610

.
ath-m.4.str
for
AT5G58610

.
ath-m.4.tis
for
AT5G58610

.
gma-u.5
for
100806062

.
gma-u.5
for
100818931

.
mtr-u.5
for
25490920

.
sly-u.5
for
101264968

.
sly-u.5
for
101245266

.
sly-u.5
for
101267496

.
zma-u.5
for
100384354

.


Ortholog ID: 3272
Species ath gma gma sly sly zma bra mtr tae hvu ghi ghi bna cre sbi sot sot cit nta nta
Symbol AT5G58610 LOC100814680 LOC102661511 LOC101267496 LOC101264968 LOC100384354 LOC103845294 LOC25489963 LOC123085575 LOC123448914 LOC107954185 LOC107940881 LOC106445866 CHLRE_06g296950v5 LOC8081435 LOC102581044 LOC102602469 LOC102623682 LOC107829855 LOC107795320
Function* PHD finger transcription factor uncharacterized LOC100814680 uncharacterized LOC102661511 increased DNA methylation 1-like uncharacterized LOC101264968 uncharacterized LOC100384354 increased DNA methylation 1 increased DNA methylation 1 uncharacterized LOC123085575 uncharacterized LOC123448914 uncharacterized LOC107954185 uncharacterized LOC107940881 increased DNA methylation 1 uncharacterized protein uncharacterized LOC8081435 uncharacterized LOC102581044 uncharacterized LOC102602469 uncharacterized LOC102623682 uncharacterized LOC107829855 uncharacterized LOC107795320
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00630 Glyoxylate and dicarboxylate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835975 100814680 102661511 101267496 101264968 100384354 103845294 25489963 123085575 123448914 107954185 107940881 106445866 5717043 8081435 102581044 102602469 102623682 107829855 107795320
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