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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-r.7   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.9   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-e.2   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.4.bio   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.4.hor   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.4.lig   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.4.str   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 ath-m.4.tis   SIZ1   DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein 
 bra-r.6   103851505   E3 SUMO-protein ligase SIZ1 
 bra-r.6   103845461   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106431741   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106385898   E3 SUMO-protein ligase SIZ1 
 bna-r.1   106401501   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107942522   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107942801   E3 SUMO-protein ligase SIZ1 
 ghi-r.1   107889158   E3 SUMO-protein ligase SIZ1 
 cit-r.1   102611995   E3 SUMO-protein ligase SIZ1-like 
 cit-r.1   102614878   E3 SUMO-protein ligase SIZ1 
 gma-u.5   SIZ1B   E3 SUMO-protein ligase SIZ1b 
 gma-u.5   100811996   E3 SUMO-protein ligase SIZ1 
 gma-u.5   100803144   E3 SUMO-protein ligase SIZ1 
 vvi-u.5   100258698   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7479894   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7458645   E3 SUMO-protein ligase SIZ1 
 ppo-u.5   7491127   E3 SUMO-protein ligase SIZ1 
 mtr-u.5   11410046   E3 SUMO-protein ligase SIZ1 
 mtr-u.5   11417575   E3 SUMO-protein ligase SIZ1 
 sly-u.5   SIZ1   E3 SUMO-protein ligase SIZ1 
 sly-u.5   101244877   E3 SUMO-protein ligase SIZ1-like 
 sot-r.1   102600633   E3 SUMO-protein ligase SIZ1 
 sot-r.1   102599774   E3 SUMO-protein ligase SIZ1-like 
 nta-r.1   107796268   E3 SUMO-protein ligase SIZ1 
 nta-r.1   107785075   E3 SUMO-protein ligase SIZ1 
 nta-r.1   107764706   E3 SUMO-protein ligase SIZ1-like 
 osa-u.5   4337672   E3 SUMO-protein ligase SIZ1-like 
 osa-u.5   4333925   E3 SUMO-protein ligase SIZ2-like 
 zma-u.5   103635939   E3 SUMO-protein ligase SIZ1 
 zma-u.5   103651650   E3 SUMO-protein ligase SIZ2 
 zma-u.5   100381570   uncharacterized LOC100381570 
 tae-r.2   123180218   E3 SUMO-protein ligase SIZ1 
 tae-r.2   123120538   E3 SUMO-protein ligase SIZ2 
 tae-r.2   123063754   E3 SUMO-protein ligase SIZ1 
 hvu-r.1   123445763   E3 SUMO-protein ligase SIZ1-like 
 hvu-r.1   123408735   E3 SUMO-protein ligase SIZ1 
 hvu-r.1   123395108   E3 SUMO-protein ligase SIZ2-like 
 sbi-r.1   8071254   E3 SUMO-protein ligase SIZ1 
 sbi-r.1   8079955   E3 SUMO-protein ligase SIZ2 
 sbi-r.1   8072901   E3 SUMO-protein ligase SIZ2 
 bdi-r.1   100825860   E3 SUMO-protein ligase SIZ2 
 bdi-r.1   100846799   probable serine/threonine-protein kinase PBL25 
 cre-r.1   CHLRE_12g500900v5   uncharacterized protein 

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Top 50 coexpressed genes to SIZ1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SIZ1 (ath-u.5 coexpression data)

CoexMap"836163"


athSIZ1 | Entrez gene ID : 836163      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 3 1 3 2 2 2 3 2 3 3 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010247 [list] [network] detection of phosphate ion  (1 genes)  IDA  
GO:0062210 [list] [network] shoot regeneration  (1 genes)  IMP  
GO:0090352 [list] [network] regulation of nitrate assimilation  (2 genes)  IMP  
GO:0010113 [list] [network] negative regulation of systemic acquired resistance  (4 genes)  IMP  
GO:0009864 [list] [network] induced systemic resistance, jasmonic acid mediated signaling pathway  (11 genes)  IMP  
GO:0016925 [list] [network] protein sumoylation  (14 genes)  IDA  
GO:0010337 [list] [network] regulation of salicylic acid metabolic process  (15 genes)  IMP  
GO:0050826 [list] [network] response to freezing  (27 genes)  IMP  
GO:0002758 [list] [network] innate immune response-activating signaling pathway  (42 genes)  IMP  
GO:2000070 [list] [network] regulation of response to water deprivation  (43 genes)  IMP  
GO:0009910 [list] [network] negative regulation of flower development  (50 genes)  IMP  
GO:0010183 [list] [network] pollen tube guidance  (50 genes)  IMP  
GO:0010286 [list] [network] heat acclimation  (64 genes)  IMP  
GO:0048481 [list] [network] plant ovule development  (68 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (116 genes)  IMP  
GO:0009787 [list] [network] regulation of abscisic acid-activated signaling pathway  (135 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (161 genes)  IMP  
GO:0051301 [list] [network] cell division  (192 genes)  IMP  
GO:0040008 [list] [network] regulation of growth  (273 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0048589 [list] [network] developmental growth  (423 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0019789 [list] [network] SUMO transferase activity  (5 genes)  IDA IMP  
GO:0032183 [list] [network] SUMO binding  (14 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001032108.1 [sequence] [blastp]
NP_001032109.2 [sequence] [blastp]
NP_001119465.1 [sequence] [blastp]
NP_001332003.1 [sequence] [blastp]
NP_200849.2 [sequence] [blastp]
NP_974969.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  vacu 1  (predict for NP_001032108.1)
nucl 9  (predict for NP_001032109.2)
nucl 9  (predict for NP_001119465.1)
nucl 9  (predict for NP_001332003.1)
nucl 9  (predict for NP_200849.2)
nucl 9  (predict for NP_974969.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001032108.1)
other 8  (predict for NP_001032109.2)
other 8  (predict for NP_001119465.1)
other 8  (predict for NP_001332003.1)
other 8  (predict for NP_200849.2)
other 8  (predict for NP_974969.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
SIZ1
ath-r.7
for
SIZ1
ath-m.9
for
SIZ1
ath-e.2
for
SIZ1
ath-m.4.bio
for
SIZ1
ath-m.4.hor
for
SIZ1
ath-m.4.lig
for
SIZ1
ath-m.4.str
for
SIZ1
ath-m.4.tis
for
SIZ1
bra-r.6
for
103851505
bra-r.6
for
103845461
bna-r.1
for
106431741
bna-r.1
for
106385898
bna-r.1
for
106401501
ghi-r.1
for
107942522
ghi-r.1
for
107942801
ghi-r.1
for
107889158
cit-r.1
for
102611995
cit-r.1
for
102614878
gma-u.5
for
SIZ1B
gma-u.5
for
100811996
gma-u.5
for
100803144
vvi-u.5
for
100258698
ppo-u.5
for
7479894
ppo-u.5
for
7458645
ppo-u.5
for
7491127
mtr-u.5
for
11410046
mtr-u.5
for
11417575
sly-u.5
for
SIZ1
sly-u.5
for
101244877
sot-r.1
for
102600633
sot-r.1
for
102599774
nta-r.1
for
107796268
nta-r.1
for
107785075
nta-r.1
for
107764706
osa-u.5
for
4337672
osa-u.5
for
4333925
zma-u.5
for
103635939
zma-u.5
for
103651650
zma-u.5
for
100381570
tae-r.2
for
123180218
tae-r.2
for
123120538
tae-r.2
for
123063754
hvu-r.1
for
123445763
hvu-r.1
for
123408735
hvu-r.1
for
123395108
sbi-r.1
for
8071254
sbi-r.1
for
8079955
sbi-r.1
for
8072901
bdi-r.1
for
100825860
bdi-r.1
for
100846799
cre-r.1
for
CHLRE_12g500900v5


Ortholog ID: 2243
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol SIZ1 LOC103851505 LOC103845461 LOC106401501 LOC106371605 LOC106346503 LOC107942522 LOC107889158 LOC107889156 LOC102611995 LOC102614878 SIZ1B LOC100803144 SIZ1A LOC100258698 LOC7458645 LOC7491127 LOC18098189 LOC11410046 LOC11417575 SIZ1 LOC101244877 LOC102600633 LOC102599774 LOC107796268 LOC107785075 LOC107830557 LOC4337672 LOC4333925 LOC103635939 LOC103651650 LOC100381570 LOC123086343 LOC123103233 LOC123111424 LOC123445763 LOC123395108 LOC123448150 LOC8071254 LOC8079955 LOC8072901 LOC100825860 LOC100832769 CHLRE_12g500900v5
Function* DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1b E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1a E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 uncharacterized LOC100381570 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ1-like E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ2-like E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ2 E3 SUMO-protein ligase SIZ1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00562 Inositol phosphate metabolism 3
bna04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 4
tae03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836163 103851505 103845461 106401501 106371605 106346503 107942522 107889158 107889156 102611995 102614878 100793735 100803144 100797252 100258698 7458645 7491127 18098189 11410046 11417575 101252253 101244877 102600633 102599774 107796268 107785075 107830557 4337672 4333925 103635939 103651650 100381570 123086343 123103233 123111424 123445763 123395108 123448150 8071254 8079955 8072901 100825860 100832769 5716385
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