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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PIF7   phytochrome-interacting factor7 
 ath-r.7   PIF7   phytochrome-interacting factor7 
 ath-e.2   PIF7   phytochrome-interacting factor7 
 gma-u.5   102667566   transcription factor PIF7 
 vvi-u.5   100262138   transcription factor PIF7 
 sly-u.5   101260653   transcription factor UNE10-like 
 sly-u.5   101263505   transcription factor UNE10 

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Top 50 coexpressed genes to PIF7 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PIF7 (ath-u.5 coexpression data)

CoexMap"836248"


athPIF7 | Entrez gene ID : 836248      
Species ath gma vvi sly tae mtr osa hvu zma ghi bdi cit bra cre sbi ppo bna nta sot
Paralog 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009704 [list] [network] de-etiolation  (18 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (776 genes)  IDA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0016607 [list] [network] nuclear speck  (52 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001032117.1 [sequence] [blastp]
NP_001331793.1 [sequence] [blastp]
NP_200935.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001032117.1)
nucl 10  (predict for NP_001331793.1)
nucl 10  (predict for NP_200935.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001032117.1)
other 6  (predict for NP_001331793.1)
other 8  (predict for NP_200935.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PIF7

.
ath-r.7
for
PIF7

.
ath-e.2
for
PIF7

.
gma-u.5
for
102667566

.
vvi-u.5
for
100262138

.
sly-u.5
for
101260653

.
sly-u.5
for
101263505

.


Ortholog ID: 12478
Species ath gma sly sly bra vvi ghi ghi bna bna sot cit nta
Symbol PIF7 LOC102667566 LOC101260653 LOC101263505 LOC103860578 LOC100262138 LOC107953466 LOC121219158 LOC106407077 LOC106439932 LOC102592550 LOC102609482 LOC107787571
Function* phytochrome-interacting factor7 transcription factor PIF7 transcription factor UNE10-like transcription factor UNE10 transcription factor PIF7 transcription factor PIF7 transcription factor UNE10 transcription factor PIF7 transcription factor PIF7 transcription factor PIF7 transcription factor UNE10 transcription factor PIF7 transcription factor UNE10
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00196 Photosynthesis - antenna proteins 6
bra00195 Photosynthesis 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00910 Nitrogen metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04081 Hormone signaling 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00196 Photosynthesis - antenna proteins 6
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836248 102667566 101260653 101263505 103860578 100262138 107953466 121219158 106407077 106439932 102592550 102609482 107787571
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