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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   ATRAD17   RADIATION SENSITIVE 17 
 ath-r.7   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.9   ATRAD17   RADIATION SENSITIVE 17 
 ath-e.2   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.4.bio   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.4.hor   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.4.lig   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.4.str   ATRAD17   RADIATION SENSITIVE 17 
 ath-m.4.tis   ATRAD17   RADIATION SENSITIVE 17 
 gma-u.5   100799826   cell cycle checkpoint protein RAD17 
 vvi-u.5   100255852   cell cycle checkpoint protein RAD17 
 ppo-u.5   18099164   cell cycle checkpoint protein RAD17 
 mtr-u.5   11438038   cell cycle checkpoint protein RAD17 
 sly-u.5   101265192   cell cycle checkpoint protein RAD17 
 osa-u.5   4332216   cell cycle checkpoint protein RAD17 
 zma-u.5   100280210   uncharacterized LOC100280210 

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Top 50 coexpressed genes to ATRAD17 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ATRAD17 (ath-u.5 coexpression data)

CoexMap"836745"


athATRAD17 | Entrez gene ID : 836745      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006282 [list] [network] regulation of DNA repair  (21 genes)  IMP  
GO:0031347 [list] [network] regulation of defense response  (290 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001330043.1 [sequence] [blastp]
NP_201414.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  vacu 2,  cyto_E.R. 2  (predict for NP_001330043.1)
nucl 3,  cyto 3,  cyto_nucl 3,  vacu 2,  cyto_E.R. 2  (predict for NP_201414.1)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for NP_001330043.1)
chlo 7,  other 5  (predict for NP_201414.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
ATRAD17
ath-r.7
for
ATRAD17
ath-m.9
for
ATRAD17
ath-e.2
for
ATRAD17
ath-m.4.bio
for
ATRAD17
ath-m.4.hor
for
ATRAD17
ath-m.4.lig
for
ATRAD17
ath-m.4.str
for
ATRAD17
ath-m.4.tis
for
ATRAD17
gma-u.5
for
100799826
vvi-u.5
for
100255852
ppo-u.5
for
18099164
mtr-u.5
for
11438038
sly-u.5
for
101265192
osa-u.5
for
4332216
zma-u.5
for
100280210


Ortholog ID: 11021
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol ATRAD17 LOC103837672 LOC106366333 LOC106392247 LOC107897600 LOC107914258 LOC102630797 LOC100799826 LOC100255852 LOC18099164 LOC11438038 LOC101265192 LOC102598005 LOC107768321 LOC107782349 LOC4332216 LOC100280210 LOC123092803 LOC123085199 LOC123449181 LOC8078861 LOC100820871 CHLRE_03g196600v5
Function* RADIATION SENSITIVE 17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17-like cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 uncharacterized LOC100280210 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 cell cycle checkpoint protein RAD17 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 2
sly03410 Base excision repair 2
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03410 Base excision repair 3
sot03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 4
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836745 103837672 106366333 106392247 107897600 107914258 102630797 100799826 100255852 18099164 11438038 101265192 102598005 107768321 107782349 4332216 100280210 123092803 123085199 123449181 8078861 100820871 5718765
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