ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	AT5G67540	Arabinanase/levansucrase/invertase
ath-r.7	AT5G67540	Arabinanase/levansucrase/invertase
ath-e.2	AT5G67540	Arabinanase/levansucrase/invertase
ath-u.5	AT3G49880	glycosyl hydrolase family protein 43
bra-r.6	103840910	uncharacterized LOC103840910
bra-r.6	103874047	uncharacterized LOC103874047
bra-r.6	103827719	uncharacterized LOC103827719
bna-r.1	BNAC08G21450D	uncharacterized BNAC08G21450D
bna-r.1	106348161	uncharacterized LOC106348161
bna-r.1	BNAANNG03950D	uncharacterized BNAANNG03950D
ghi-r.1	107932582	uncharacterized LOC107932582
ghi-r.1	107924392	uncharacterized LOC107924392
ghi-r.1	107922443	uncharacterized LOC107922443
cit-r.1	102623877	uncharacterized LOC102623877
gma-u.5	100782607	uncharacterized LOC100782607
gma-u.5	100775557	uncharacterized LOC100775557
gma-u.5	100813539	uncharacterized LOC100813539
vvi-u.5	100854050	uncharacterized LOC100854050
ppo-u.5	7476438	uncharacterized LOC7476438
mtr-u.5	11428468	uncharacterized LOC11428468
sly-u.5	101262370	uncharacterized LOC101262370
sot-r.1	102593325	uncharacterized LOC102593325
sot-r.1	102597099	uncharacterized LOC102597099
nta-r.1	107791637	uncharacterized LOC107791637
nta-r.1	107797220	uncharacterized LOC107797220
osa-u.5	4352047	uncharacterized LOC4352047
osa-u.5	4324837	uncharacterized LOC4324837
zma-u.5	100285562	glycosyl hydrolase, family 43 protein
zma-u.5	103650927	Arabinanase/levansucrase/invertase
zma-u.5	103639465	Arabinanase/levansucrase/invertase
tae-r.2	123079283	uncharacterized LOC123079283
tae-r.2	123098372	uncharacterized LOC123098372
tae-r.2	123084975	uncharacterized LOC123084975
hvu-r.1	123444503	uncharacterized LOC123444503
hvu-r.1	123449411	uncharacterized LOC123449411
sbi-r.1	8054238	uncharacterized LOC8054238
sbi-r.1	8061013	uncharacterized LOC8061013
bdi-r.1	104581847	uncharacterized LOC104581847
bdi-r.1	100836340	uncharacterized LOC100836340

Top 50 coexpressed genes to AT5G67540 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G67540 (ath-u.5 coexpression data)

CoexMap"836890"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0010406 [list] [network] classical arabinogalactan protein metabolic process

(2 genes)

IMP

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	HDA IDA
GO:0005634 [list] [network] nucleus	(10367 genes)	ISM

GO MF

GO:0004565 [list] [network] beta-galactosidase activity

(13 genes)

IDA

Protein

NP_001331292.1 [sequence] [blastp]
NP_201555.2 [sequence] [blastp]
NP_975008.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, cyto 2, E.R._vacu 2, mito 1, cyto_pero 1	(predict for NP_001331292.1)
chlo 3, cyto 2, vacu 1, cyto_nucl 1, cyto_plas 1	(predict for NP_201555.2)
chlo 4, cyto 4, nucl 1, mito 1, E.R. 1, golg 1	(predict for NP_975008.1)

Subcellular
localization
TargetP

other 4	(predict for NP_001331292.1)
mito 7	(predict for NP_201555.2)
other 8, mito 3	(predict for NP_975008.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G67540	ath-r.7 for AT5G67540	ath-e.2 for AT5G67540	ath-u.5 for AT3G49880	bra-r.6 for 103840910	bra-r.6 for 103874047	bra-r.6 for 103827719	bna-r.1 for BNAC08G21450D	bna-r.1 for 106348161	bna-r.1 for BNAANNG03950D	ghi-r.1 for 107932582	ghi-r.1 for 107924392	ghi-r.1 for 107922443	cit-r.1 for 102623877	gma-u.5 for 100782607	gma-u.5 for 100775557	gma-u.5 for 100813539	vvi-u.5 for 100854050	ppo-u.5 for 7476438	mtr-u.5 for 11428468	sly-u.5 for 101262370	sot-r.1 for 102593325	sot-r.1 for 102597099	nta-r.1 for 107791637	nta-r.1 for 107797220	osa-u.5 for 4352047	osa-u.5 for 4324837	zma-u.5 for 100285562	zma-u.5 for 103650927	zma-u.5 for 103639465	tae-r.2 for 123079283	tae-r.2 for 123098372	tae-r.2 for 123084975	hvu-r.1 for 123444503	hvu-r.1 for 123449411	sbi-r.1 for 8054238	sbi-r.1 for 8061013	bdi-r.1 for 104581847	bdi-r.1 for 100836340

Ortholog

Ortholog ID: 3944

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

Arabinanase/levansucrase/invertase

glycosyl hydrolase family protein 43

uncharacterized LOC103840910

uncharacterized LOC103874047

uncharacterized LOC103827719

uncharacterized BNAC08G21450D

uncharacterized BNAANNG03950D

uncharacterized LOC106443815

uncharacterized LOC107932582

uncharacterized LOC107924392

uncharacterized LOC107922443

uncharacterized LOC102623877

uncharacterized LOC100782607

uncharacterized LOC100775557

uncharacterized LOC100813539

uncharacterized LOC100854050

uncharacterized LOC7476438

uncharacterized LOC11428468

uncharacterized LOC101262370

uncharacterized LOC102593325

uncharacterized LOC102597099

uncharacterized LOC107791637

uncharacterized LOC107822725

uncharacterized LOC4352047

uncharacterized LOC4324837

glycosyl hydrolase, family 43 protein

Arabinanase/levansucrase/invertase

uncharacterized LOC123098372

uncharacterized LOC123093094

uncharacterized LOC123444503

uncharacterized LOC123449411

uncharacterized LOC8054238

uncharacterized LOC8061013

uncharacterized LOC104581847

uncharacterized LOC100836340

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03410	Base excision repair	2
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01230	Biosynthesis of amino acids	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00513	Various types of N-glycan biosynthesis	3
cit04141	Protein processing in endoplasmic reticulum	3
cit00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	4
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr00220	Arginine biosynthesis	2
mtr01210	2-Oxocarboxylic acid metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00592	alpha-Linolenic acid metabolism	2
nta00600	Sphingolipid metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
zma01230	Biosynthesis of amino acids	2
zma00040	Pentose and glucuronate interconversions	2
zma00052	Galactose metabolism	2
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00600	Sphingolipid metabolism	2
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	2
tae00620	Pyruvate metabolism	2
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae00640	Propanoate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	3
tae00620	Pyruvate metabolism	3
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae00640	Propanoate metabolism	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00670	One carbon pool by folate	3
hvu01200	Carbon metabolism	3
hvu01240	Biosynthesis of cofactors	2
hvu00270	Cysteine and methionine metabolism	2
hvu01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	7
bdi00510	N-Glycan biosynthesis	4
bdi00513	Various types of N-glycan biosynthesis	4
bdi03060	Protein export	3
bdi00520	Amino sugar and nucleotide sugar metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

836890

824150

103840910

103874047

103827719

106451220

106390884

106443815

107932582

107924392

107922443

102623877

100782607

100775557

100813539

100854050

7476438

11428468

101262370

102593325

102597099

107791637

107822725

4352047

4324837

100285562

103650927

103639465

123098372

123093094

123444503

123449411

8054238

8061013

104581847

100836340

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	3	1	3	1	1	1	1	2	2	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G67540 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G67540 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**