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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   YUC9   YUCCA 9 
 ath-r.7   YUC9   YUCCA 9 
 ath-m.9   YUC9   YUCCA 9 
 ath-e.2   YUC9   YUCCA 9 
 ath-m.4.bio   YUC9   YUCCA 9 
 ath-m.4.hor   YUC9   YUCCA 9 
 ath-m.4.lig   YUC9   YUCCA 9 
 ath-m.4.str   YUC9   YUCCA 9 
 ath-m.4.tis   YUC9   YUCCA 9 
 ath-u.5   YUC8   Flavin-binding monooxygenase family protein 
 ath-u.5   YUC5   Flavin-binding monooxygenase family protein 
 mtr-u.5   112416721   probable indole-3-pyruvate monooxygenase YUCCA8 
 mtr-u.5   25484175   probable indole-3-pyruvate monooxygenase YUCCA9 
 sly-u.5   FZY4   probable indole-3-pyruvate monooxygenase YUCCA8 
 osa-u.5   4343079   probable indole-3-pyruvate monooxygenase YUCCA5 
 osa-u.5   4334994   probable indole-3-pyruvate monooxygenase YUCCA5 
 zma-u.5   103646858   probable indole-3-pyruvate monooxygenase YUCCA9 
 zma-u.5   100281864   uncharacterized LOC100281864 
 zma-u.5   100281570   uncharacterized LOC100281570 

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Top 50 coexpressed genes to YUC9 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to YUC9 (ath-u.5 coexpression data)

CoexMap"837024"


athYUC9 | Entrez gene ID : 837024      
Species ath mtr sly osa zma bdi hvu bra vvi cit gma bna ppo sbi ghi sot nta cre tae
Paralog 11 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00380 [list] [network] Tryptophan metabolism (64 genes)
ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009635 [list] [network] response to herbicide  (11 genes)  IEP  
GO:0010262 [list] [network] somatic embryogenesis  (27 genes)  IEP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IEP  
GO CC
GO MF
Protein NP_171914.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  E.R. 1,  chlo_mito 1  (predict for NP_171914.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_171914.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
YUC9
ath-r.7
for
YUC9
ath-m.9
for
YUC9
ath-e.2
for
YUC9
ath-m.4.bio
for
YUC9
ath-m.4.hor
for
YUC9
ath-m.4.lig
for
YUC9
ath-m.4.str
for
YUC9
ath-m.4.tis
for
YUC9
ath-u.5
for
YUC8
ath-u.5
for
YUC5
mtr-u.5
for
112416721
mtr-u.5
for
25484175
sly-u.5
for
FZY4
osa-u.5
for
4343079
osa-u.5
for
4334994
zma-u.5
for
103646858
zma-u.5
for
100281864
zma-u.5
for
100281570


Ortholog ID: 1100
Species ath ath bra bna ghi cit cit mtr sly sly sot nta nta osa osa zma zma hvu hvu sbi sbi bdi
Symbol YUC3 YUC8 LOC103854158 LOC106359824 LOC107955258 LOC102625327 LOC102616113 LOC11445283 LOC101267265 FZY4 LOC102582086 LOC107773517 LOC107810383 LOC4343079 LOC4334994 LOC100281864 LOC103646858 LOC123399706 LOC123431491 LOC8059733 LOC8065984 LOC100839448
Function* YUCCA 3 Flavin-binding monooxygenase family protein probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA3 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8 probable indole-3-pyruvate monooxygenase YUCCA5 putative indole-3-pyruvate monooxygenase YUCCA8 putative indole-3-pyruvate monooxygenase YUCCA9 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 uncharacterized LOC100281864 probable indole-3-pyruvate monooxygenase YUCCA9 probable indole-3-pyruvate monooxygenase YUCCA9 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA5 probable indole-3-pyruvate monooxygenase YUCCA8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00380 Tryptophan metabolism 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
ath00380 Tryptophan metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
bna00380 Tryptophan metabolism 4
bna00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 5
ghi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 6
cit00592 alpha-Linolenic acid metabolism 4
cit00010 Glycolysis / Gluconeogenesis 2
cit00071 Fatty acid degradation 2
cit00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
cit00909 Sesquiterpenoid and triterpenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00380 Tryptophan metabolism 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
sot00380 Tryptophan metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00380 Tryptophan metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00380 Tryptophan metabolism 2
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00250 Alanine, aspartate and glutamate metabolism 4
bdi00410 beta-Alanine metabolism 4
bdi00430 Taurine and hypotaurine metabolism 4
bdi00650 Butanoate metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839474 828993 103854158 106359824 107955258 102625327 102616113 11445283 101267265 101260940 102582086 107773517 107810383 4343079 4334994 100281864 103646858 123399706 123431491 8059733 8065984 100839448
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