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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-r.7   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.9   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-e.2   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.4.bio   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.4.hor   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.4.lig   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.4.str   AT1G07970   cytochrome B561, amino-terminal protein 
 ath-m.4.tis   AT1G07970   cytochrome B561, amino-terminal protein 
 bra-r.6   103871537   uncharacterized LOC103871537 
 bna-r.1   106346372   uncharacterized LOC106346372 
 bna-r.1   106415740   uncharacterized LOC106415740 
 ghi-r.1   107889159   transmembrane protein 209 
 ghi-r.1   107942712   transmembrane protein 209 
 cit-r.1   102614382   uncharacterized LOC102614382 
 gma-u.5   100816099   transmembrane protein 209 
 vvi-u.5   100256992   uncharacterized LOC100256992 
 ppo-u.5   7489333   uncharacterized LOC7489333 
 mtr-u.5   11411071   transmembrane protein 209 
 sly-u.5   101252556   uncharacterized LOC101252556 
 sot-r.1   102601434   transmembrane protein 209 
 nta-r.1   107796269   uncharacterized LOC107796269 
 nta-r.1   107785068   uncharacterized LOC107785068 
 osa-u.5   4332493   uncharacterized LOC4332493 
 zma-u.5   100279033   uncharacterized LOC100279033 
 tae-r.2   123092478   transmembrane protein 209 
 tae-r.2   123085561   transmembrane protein 209 
 tae-r.2   123097794   transmembrane protein 209 
 hvu-r.1   123448927   transmembrane protein 209 
 sbi-r.1   8081438   transmembrane protein 209 
 bdi-r.1   100833429   transmembrane protein 209 
 cre-r.1   CHLRE_12g555200v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G07970 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G07970 (ath-u.5 coexpression data)

CoexMap"837312"


athAT1G07970 | Entrez gene ID : 837312      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051292 [list] [network] nuclear pore complex assembly  (1 genes)  IPI  
GO CC
GO:0005643 [list] [network] nuclear pore  (18 genes)  IPI  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0060090 [list] [network] molecular adaptor activity  (805 genes)  IPI  
Protein NP_172275.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 5,  nucl 2,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_172275.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_172275.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G07970
ath-r.7
for
AT1G07970
ath-m.9
for
AT1G07970
ath-e.2
for
AT1G07970
ath-m.4.bio
for
AT1G07970
ath-m.4.hor
for
AT1G07970
ath-m.4.lig
for
AT1G07970
ath-m.4.str
for
AT1G07970
ath-m.4.tis
for
AT1G07970
bra-r.6
for
103871537
bna-r.1
for
106346372
bna-r.1
for
106415740
ghi-r.1
for
107889159
ghi-r.1
for
107942712
cit-r.1
for
102614382
gma-u.5
for
100816099
vvi-u.5
for
100256992
ppo-u.5
for
7489333
mtr-u.5
for
11411071
sly-u.5
for
101252556
sot-r.1
for
102601434
nta-r.1
for
107796269
nta-r.1
for
107785068
osa-u.5
for
4332493
zma-u.5
for
100279033
tae-r.2
for
123092478
tae-r.2
for
123085561
tae-r.2
for
123097794
hvu-r.1
for
123448927
sbi-r.1
for
8081438
bdi-r.1
for
100833429
cre-r.1
for
CHLRE_12g555200v5


Ortholog ID: 11032
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT1G07970 LOC103871537 LOC106346372 LOC106415740 LOC107889159 LOC107942712 LOC102614382 LOC100816099 LOC100256992 LOC7489333 LOC11411071 LOC101252556 LOC102601434 LOC107796269 LOC107785068 LOC4332493 LOC100279033 LOC123092478 LOC123085561 LOC123097794 LOC123448927 LOC8081438 LOC100833429 CHLRE_12g555200v5
Function* cytochrome B561, amino-terminal protein uncharacterized LOC103871537 uncharacterized LOC106346372 uncharacterized LOC106415740 transmembrane protein 209 transmembrane protein 209 uncharacterized LOC102614382 transmembrane protein 209 uncharacterized LOC100256992 uncharacterized LOC7489333 transmembrane protein 209 uncharacterized LOC101252556 transmembrane protein 209 uncharacterized LOC107796269 uncharacterized LOC107785068 uncharacterized LOC4332493 uncharacterized LOC100279033 transmembrane protein 209 transmembrane protein 209 transmembrane protein 209 transmembrane protein 209 transmembrane protein 209 transmembrane protein 209 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 4
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 8
bna03015 mRNA surveillance pathway 6
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 8
bna03015 mRNA surveillance pathway 6
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00310 Lysine degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00310 Lysine degradation 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03015 mRNA surveillance pathway 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04626 Plant-pathogen interaction 2
gma03020 RNA polymerase 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03040 Spliceosome 2
vvi00020 Citrate cycle (TCA cycle) 2
vvi00785 Lipoic acid metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03015 mRNA surveillance pathway 4
ppo03018 RNA degradation 4
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 7
sly03040 Spliceosome 3
sly03020 RNA polymerase 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta01230 Biosynthesis of amino acids 3
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta01230 Biosynthesis of amino acids 3
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa03082 ATP-dependent chromatin remodeling 2
osa03010 Ribosome 2
osa00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
hvu03018 RNA degradation 2
hvu03030 DNA replication 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837312 103871537 106346372 106415740 107889159 107942712 102614382 100816099 100256992 7489333 11411071 101252556 102601434 107796269 107785068 4332493 100279033 123092478 123085561 123097794 123448927 8081438 100833429 5719731
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