ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT1G23040	hydroxyproline-rich glycoprotein family protein
ath-u.5	AT1G70990	proline-rich family protein
bra-r.6	103840800	probable pathogenesis-related protein ARB_02861
bra-r.6	103829296	glyceraldehyde-3-phosphate dehydrogenase, testis-specific
bna-r.1	106431005	glyceraldehyde-3-phosphate dehydrogenase, testis-specific
bna-r.1	106429726	probable pathogenesis-related protein ARB_02861
bna-r.1	106411269	glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like
ghi-r.1	107921752	proline-rich receptor-like protein kinase PERK2
ghi-r.1	107934499	uncharacterized proline-rich protein
ghi-r.1	107946281	uncharacterized proline-rich protein
cit-r.1	102629807	sulfated surface glycoprotein 185-like
gma-u.5	100808308	uncharacterized LOC100808308
gma-u.5	100780111	classical arabinogalactan protein 5
gma-u.5	100783022	pectinesterase inhibitor 10
vvi-u.5	100255988	uncharacterized LOC100255988
ppo-u.5	7459784	formin-like protein 20
ppo-u.5	7482880	leucine-rich repeat extensin-like protein 6
mtr-u.5	25482495	leucine-rich repeat extensin-like protein 1
mtr-u.5	25493021	extensin
sly-u.5	101253482	U1 small nuclear ribonucleoprotein C
sot-r.1	102582165	cytokinesis protein sepA-like
sot-r.1	102579811	cytokinesis protein sepA-like

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005886 [list] [network] plasma membrane	(2598 genes)	ISM
GO:0016020 [list] [network] membrane	(3740 genes)	TAS

GO MF

Protein

NP_683269.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, golg_plas 4, golg 2, chlo 1, E.R. 1

(predict for NP_683269.1)

Subcellular
localization
TargetP

scret 7

(predict for NP_683269.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT1G23040	ath-u.5 for AT1G70990	bra-r.6 for 103840800	bra-r.6 for 103829296	bna-r.1 for 106431005	bna-r.1 for 106429726	bna-r.1 for 106411269	ghi-r.1 for 107921752	ghi-r.1 for 107934499	ghi-r.1 for 107946281	cit-r.1 for 102629807	gma-u.5 for 100808308	gma-u.5 for 100780111	gma-u.5 for 100783022	vvi-u.5 for 100255988	ppo-u.5 for 7459784	ppo-u.5 for 7482880	mtr-u.5 for 25482495	mtr-u.5 for 25493021	sly-u.5 for 101253482	sot-r.1 for 102582165	sot-r.1 for 102579811

Ortholog

Ortholog ID: 8230

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

Symbol

Function^*

hydroxyproline-rich glycoprotein family protein

proline-rich family protein

probable pathogenesis-related protein ARB_02861

glyceraldehyde-3-phosphate dehydrogenase, testis-specific

probable pathogenesis-related protein ARB_02861

glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like

uncharacterized proline-rich protein

myb-related transcription factor, partner of profilin

sulfated surface glycoprotein 185-like

uncharacterized LOC100808308

classical arabinogalactan protein 5

pectinesterase inhibitor 10

uncharacterized LOC100255988

formin-like protein 20

leucine-rich repeat extensin-like protein 6

leucine-rich repeat extensin-like protein 1

extensin

U1 small nuclear ribonucleoprotein C

cytokinesis protein sepA-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00901	Indole alkaloid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	6
bna00280	Valine, leucine and isoleucine degradation	6
bna00290	Valine, leucine and isoleucine biosynthesis	6
bna00770	Pantothenate and CoA biosynthesis	6
bna00966	Glucosinolate biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00250	Alanine, aspartate and glutamate metabolism	2
gma00410	beta-Alanine metabolism	2
gma00430	Taurine and hypotaurine metabolism	2
gma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	4
ppo00670	One carbon pool by folate	3
ppo00030	Pentose phosphate pathway	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	6
sot00941	Flavonoid biosynthesis	4
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

838912

843438

103840800

103829296

106431005

106429726

106411269

107934499

107946281

107886358

102629807

100808308

100780111

100783022

100255988

7459784

7482880

25482495

25493021

101253482

102582165

102579811

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT1G23040 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G23040 (ath-u.5 coexpression data)


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	bdi	nta	osa	tae	zma	cre	sbi	hvu
Paralog	2	2	3	3	1	3	1	2	2	1	2	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G23040 (ath-u.5 coexpression data)

Top 50 enrichment test to AT1G23040 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**