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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   FLP   Duplicated homeodomain-like superfamily protein 
 ath-r.7   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.9   FLP   Duplicated homeodomain-like superfamily protein 
 ath-e.2   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.4.bio   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.4.hor   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.4.lig   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.4.str   FLP   Duplicated homeodomain-like superfamily protein 
 ath-m.4.tis   FLP   Duplicated homeodomain-like superfamily protein 
 ath-u.5   MYB88   myb domain protein 88 
 gma-u.5   100807667   transcription factor MYB88 
 vvi-u.5   100246639   transcription factor MYB124 
 ppo-u.5   7471495   transcription factor MYB88 
 ppo-u.5   7459044   transcription factor MYB124 
 mtr-u.5   25502747   transcription factor MYB124 
 mtr-u.5   11427731   transcription factor MYB88 
 sly-u.5   101260045   transcription factor MYB124 
 osa-u.5   4343977   transcription factor MYB124 
 zma-u.5   100381853   uncharacterized LOC100381853 

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Top 50 coexpressed genes to FLP (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FLP (ath-u.5 coexpression data)

CoexMap"837997"


athFLP | Entrez gene ID : 837997      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 10 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0050891 [list] [network] multicellular organismal-level water homeostasis  (3 genes)  IMP  
GO:1901333 [list] [network] positive regulation of lateral root development  (4 genes)  IMP  
GO:0010235 [list] [network] guard mother cell cytokinesis  (5 genes)  IMP  
GO:0010376 [list] [network] stomatal complex formation  (5 genes)  IEP IMP  
GO:1902806 [list] [network] regulation of cell cycle G1/S phase transition  (5 genes)  IMP  
GO:0090436 [list] [network] leaf pavement cell development  (8 genes)  IMP  
GO:0010444 [list] [network] guard mother cell differentiation  (11 genes)  IMP  
GO:0009554 [list] [network] megasporogenesis  (12 genes)  IMP  
GO:1901002 [list] [network] positive regulation of response to salt stress  (13 genes)  IMP  
GO:2000037 [list] [network] regulation of stomatal complex patterning  (14 genes)  IMP  
GO:1902584 [list] [network] positive regulation of response to water deprivation  (19 genes)  IMP  
GO:0010052 [list] [network] guard cell differentiation  (21 genes)  IGI NAS  
GO:0032875 [list] [network] regulation of DNA endoreduplication  (36 genes)  IMP  
GO:0080022 [list] [network] primary root development  (40 genes)  IMP  
GO:0009926 [list] [network] auxin polar transport  (72 genes)  IMP  
GO:0009629 [list] [network] response to gravity  (111 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (161 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IDA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001077534.1 [sequence] [blastp]
NP_001321792.1 [sequence] [blastp]
NP_001321793.1 [sequence] [blastp]
NP_563948.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001077534.1)
nucl 10  (predict for NP_001321792.1)
nucl 10  (predict for NP_001321793.1)
nucl 10  (predict for NP_563948.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001077534.1)
mito 5,  other 3  (predict for NP_001321792.1)
mito 5,  other 3  (predict for NP_001321793.1)
other 8  (predict for NP_563948.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
FLP
ath-r.7
for
FLP
ath-m.9
for
FLP
ath-e.2
for
FLP
ath-m.4.bio
for
FLP
ath-m.4.hor
for
FLP
ath-m.4.lig
for
FLP
ath-m.4.str
for
FLP
ath-m.4.tis
for
FLP
ath-u.5
for
MYB88
gma-u.5
for
100807667
vvi-u.5
for
100246639
ppo-u.5
for
7471495
ppo-u.5
for
7459044
mtr-u.5
for
25502747
mtr-u.5
for
11427731
sly-u.5
for
101260045
osa-u.5
for
4343977
zma-u.5
for
100381853


Ortholog ID: 4333
Species ath bra bra bna bna ghi ghi cit vvi ppo ppo mtr mtr sly sot sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol FLP LOC103827503 LOC103872133 LOC106438192 LOC106369333 LOC107948812 LOC107887116 LOC102629689 LOC100246639 LOC7471495 LOC7459044 LOC25502747 LOC11427731 LOC101260045 LOC102589190 LOC102593320 LOC107793683 LOC107792411 LOC4343977 LOC100381853 LOC123044121 LOC123187866 LOC123425207 LOC8063503 LOC100835080 CHLRE_02g103450v5
Function* Duplicated homeodomain-like superfamily protein transcription factor MYB88 transcription factor MYB124 transcription factor MYB88 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB124 transcription factor MYB124 transcription factor MYB88 transcription factor MYB124 transcription factor RAX2-like myb-related protein A transcription factor MYB124-like transcription factor MYB124 transcription factor MYB124 uncharacterized LOC100381853 transcription factor MYB88 transcription factor MYB88 uncharacterized LOC123425207 transcription factor MYB124 transcription factor MYB124 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 5
osa03460 Fanconi anemia pathway 3
osa03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
sbi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837997 103827503 103872133 106438192 106369333 107948812 107887116 102629689 100246639 7471495 7459044 25502747 11427731 101260045 102589190 102593320 107793683 107792411 4343977 100381853 123044121 123187866 123425207 8063503 100835080 5725546
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