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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   HDG12   homeodomain GLABROUS 12 
 ath-r.7   HDG12   homeodomain GLABROUS 12 
 ath-m.9   HDG12   homeodomain GLABROUS 12 
 ath-e.2   HDG12   homeodomain GLABROUS 12 
 ath-m.4.bio   HDG12   homeodomain GLABROUS 12 
 ath-m.4.hor   HDG12   homeodomain GLABROUS 12 
 ath-m.4.lig   HDG12   homeodomain GLABROUS 12 
 ath-m.4.str   HDG12   homeodomain GLABROUS 12 
 ath-m.4.tis   HDG12   homeodomain GLABROUS 12 
 ath-u.5   HDG11   homeodomain GLABROUS 11 
 gma-u.5   100796808   homeobox-leucine zipper protein HDG11 
 vvi-u.5   100251182   homeobox-leucine zipper protein HDG11 
 ppo-u.5   18105572   homeobox-leucine zipper protein HDG11 
 sly-u.5   101253569   homeobox-leucine zipper protein HDG11 
 sly-u.5   101246729   homeobox-leucine zipper protein HDG11-like 
 osa-u.5   4340445   homeobox-leucine zipper protein ROC8-like 
 zma-u.5   100275344   uncharacterized LOC100275344 
 zma-u.5   100502181   uncharacterized LOC100502181 
 zma-u.5   103629886   homeobox-leucine zipper protein ROC8 

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Top 50 coexpressed genes to HDG12 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to HDG12 (ath-u.5 coexpression data)

CoexMap"838371"


athHDG12 | Entrez gene ID : 838371      
Species ath gma vvi ppo sly osa zma bdi mtr bra hvu cit bna sbi ghi sot nta cre tae
Paralog 10 1 1 1 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048497 [list] [network] maintenance of floral organ identity  (8 genes)  IGI IMP  
GO:0010091 [list] [network] trichome branching  (31 genes)  IGI  
GO:0030154 [list] [network] cell differentiation  (627 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (47 genes)  IEA  
GO:0008289 [list] [network] lipid binding  (245 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001323262.1 [sequence] [blastp]
NP_564041.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cyto 1  (predict for NP_001323262.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_564041.2)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_001323262.1)
other 8,  chlo 3  (predict for NP_564041.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
HDG12
ath-r.7
for
HDG12
ath-m.9
for
HDG12
ath-e.2
for
HDG12
ath-m.4.bio
for
HDG12
ath-m.4.hor
for
HDG12
ath-m.4.lig
for
HDG12
ath-m.4.str
for
HDG12
ath-m.4.tis
for
HDG12
ath-u.5
for
HDG11
gma-u.5
for
100796808
vvi-u.5
for
100251182
ppo-u.5
for
18105572
sly-u.5
for
101253569
sly-u.5
for
101246729
osa-u.5
for
4340445
zma-u.5
for
100275344
zma-u.5
for
100502181
zma-u.5
for
103629886


Ortholog ID: 2591
Species ath ath bra bna bna ghi ghi cit gma vvi sly sly sot nta nta osa zma zma tae tae sbi sbi bdi bdi
Symbol HDG11 HDG12 LOC103831820 LOC106427172 LOC106394960 LOC121211260 LOC107904747 LOC102613958 LOC100809075 LOC100251182 LOC101246729 LOC101253569 LOC102579074 LOC107770385 LOC107767107 LOC4340445 LOC103629886 LOC100275344 LOC123150873 LOC123138387 LOC8077335 LOC8075216 LOC100825927 LOC100830297
Function* homeodomain GLABROUS 11 homeodomain GLABROUS 12 homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG12-like homeobox-leucine zipper protein HDG12-like homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG11-like homeobox-leucine zipper protein HDG11-like homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG11-like homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG11-like homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein HDG11 homeobox-leucine zipper protein ROC8-like homeobox-leucine zipper protein ROC8 uncharacterized LOC100275344 homeobox-leucine zipper protein ROC8 homeobox-leucine zipper protein ROC8 homeobox-leucine zipper protein ROC8 homeobox-leucine zipper protein ROC8 homeobox-leucine zipper protein ROC8 homeobox-leucine zipper protein ROC8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 3
bra00970 Aminoacyl-tRNA biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna00541 Biosynthesis of various nucleotide sugars 4
bna01250 Biosynthesis of nucleotide sugars 4
bna00230 Purine metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 5
ghi00062 Fatty acid elongation 3
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 5
ghi00062 Fatty acid elongation 3
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
nta01212 Fatty acid metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00062 Fatty acid elongation 2
zma04626 Plant-pathogen interaction 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 2
bdi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843671 838371 103831820 106427172 106394960 121211260 107904747 102613958 100809075 100251182 101246729 101253569 102579074 107770385 107767107 4340445 103629886 100275344 123150873 123138387 8077335 8075216 100825927 100830297
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