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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   TPK1   thiamine pyrophosphokinase1 
 ath-r.7   TPK1   thiamine pyrophosphokinase1 
 ath-e.2   TPK1   thiamine pyrophosphokinase1 
 ath-u.5   TPK2   thiamine pyrophosphokinase 2 
 bra-r.6   103836640   thiamine pyrophosphokinase 1 
 bra-r.6   103844552   thiamine pyrophosphokinase 1 
 bna-r.1   106397835   thiamine pyrophosphokinase 1 
 bna-r.1   106399572   thiamine pyrophosphokinase 1-like 
 bna-r.1   125587380   thiamine pyrophosphokinase 1-like 
 ghi-r.1   107949693   thiamine pyrophosphokinase 1 
 ghi-r.1   107917361   thiamine pyrophosphokinase 1 
 ghi-r.1   107931208   thiamine pyrophosphokinase 1 
 cit-r.1   102620459   thiamine pyrophosphokinase 1 
 gma-u.5   100786303   thiamine pyrophosphokinase 2 
 gma-u.5   100795320   thiamin pyrophosphokinase 1-like 
 vvi-u.5   100246863   thiamine pyrophosphokinase 1 
 ppo-u.5   7457944   thiamine pyrophosphokinase 1 
 ppo-u.5   7478836   thiamine pyrophosphokinase 1 
 mtr-u.5   11431566   thiamine pyrophosphokinase 1 
 sly-u.5   101250050   thiamine pyrophosphokinase 1 
 sot-r.1   102596818   thiamine pyrophosphokinase 2 
 nta-r.1   107803471   thiamine pyrophosphokinase 2 
 nta-r.1   107788774   thiamine pyrophosphokinase 1-like 
 nta-r.1   107787643   thiamine pyrophosphokinase 1 
 osa-u.5   4326288   thiamine pyrophosphokinase 2-like 
 osa-u.5   4326818   thiamine pyrophosphokinase 1-like 
 osa-u.5   4338566   thiamine pyrophosphokinase 3-like 
 zma-u.5   100285737   thiamin pyrophosphokinase 1 
 zma-u.5   100280851   thiamin pyrophosphokinase 1 
 zma-u.5   109944860   thiamine pyrophosphokinase 1 
 tae-r.2   123080433   thiamine pyrophosphokinase 1 
 tae-r.2   123063244   thiamine pyrophosphokinase 1 
 tae-r.2   123053306   thiamine pyrophosphokinase 3 
 hvu-r.1   123445342   thiamine pyrophosphokinase 1-like 
 hvu-r.1   123440431   thiamine pyrophosphokinase 3 
 hvu-r.1   123424715   thiamine pyrophosphokinase 2 
 sbi-r.1   8075346   thiamine pyrophosphokinase 2 
 sbi-r.1   8062704   thiamine pyrophosphokinase 1 
 sbi-r.1   8059405   thiamine pyrophosphokinase 1 
 bdi-r.1   100828492   thiamine pyrophosphokinase 3 
 bdi-r.1   100832136   thiamine pyrophosphokinase 2 
 bdi-r.1   100840605   thiamine pyrophosphokinase 1 
 cre-r.1   CHLRE_01g040050v5   uncharacterized protein 

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Top 50 coexpressed genes to TPK1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TPK1 (ath-u.5 coexpression data)

CoexMap"839303"


athTPK1 | Entrez gene ID : 839303      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 2 1 1 1 3 3 3 3 3 3 3 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00730 [list] [network] Thiamine metabolism (21 genes)
ath01240 [list] [network] Biosynthesis of cofactors (237 genes)
GO BP
GO:0006772 [list] [network] thiamine metabolic process  (7 genes)  IGI  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO MF
GO:0004788 [list] [network] thiamine diphosphokinase activity  (2 genes)  IDA  
Protein NP_001117219.1 [sequence] [blastp]
NP_001321568.1 [sequence] [blastp]
NP_001321569.1 [sequence] [blastp]
NP_563669.1 [sequence] [blastp]
NP_849579.1 [sequence] [blastp]
NP_849580.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 5,  nucl 4,  cyto 4,  chlo 1,  mito 1,  extr 1,  pero 1,  chlo_mito 1  (predict for NP_001117219.1)
cyto 6,  nucl 1,  chlo 1,  mito 1,  golg 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_001321568.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for NP_001321569.1)
cyto 6,  nucl 2,  chlo 1,  mito 1,  golg 1,  chlo_mito 1  (predict for NP_563669.1)
nucl 6,  cyto 3,  cysk_nucl 3  (predict for NP_849579.1)
cyto 6,  nucl 2,  chlo 1,  mito 1,  golg 1,  chlo_mito 1  (predict for NP_849580.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001117219.1)
other 3,  chlo 3  (predict for NP_001321568.1)
other 8,  mito 3  (predict for NP_001321569.1)
other 6  (predict for NP_563669.1)
other 8,  mito 3  (predict for NP_849579.1)
other 3,  chlo 3  (predict for NP_849580.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
TPK1
ath-r.7
for
TPK1
ath-e.2
for
TPK1
ath-u.5
for
TPK2
bra-r.6
for
103836640
bra-r.6
for
103844552
bna-r.1
for
106397835
bna-r.1
for
106399572
bna-r.1
for
125587380
ghi-r.1
for
107949693
ghi-r.1
for
107917361
ghi-r.1
for
107931208
cit-r.1
for
102620459
gma-u.5
for
100786303
gma-u.5
for
100795320
vvi-u.5
for
100246863
ppo-u.5
for
7457944
ppo-u.5
for
7478836
mtr-u.5
for
11431566
sly-u.5
for
101250050
sot-r.1
for
102596818
nta-r.1
for
107803471
nta-r.1
for
107788774
nta-r.1
for
107787643
osa-u.5
for
4326288
osa-u.5
for
4326818
osa-u.5
for
4338566
zma-u.5
for
100285737
zma-u.5
for
100280851
zma-u.5
for
109944860
tae-r.2
for
123080433
tae-r.2
for
123063244
tae-r.2
for
123053306
hvu-r.1
for
123445342
hvu-r.1
for
123440431
hvu-r.1
for
123424715
sbi-r.1
for
8075346
sbi-r.1
for
8062704
sbi-r.1
for
8059405
bdi-r.1
for
100828492
bdi-r.1
for
100832136
bdi-r.1
for
100840605
cre-r.1
for
CHLRE_01g040050v5


Ortholog ID: 3442
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol TPK1 TPK2 LOC103836640 LOC103844552 LOC106397835 LOC106399572 LOC106422916 LOC107917361 LOC107931208 LOC107946087 LOC102620459 LOC100786303 LOC100795320 LOC100246863 LOC7457944 LOC7478836 LOC11431566 LOC101250050 LOC102596818 LOC107803471 LOC107787643 LOC142176147 LOC4326288 LOC4326818 LOC4338566 LOC100285737 LOC100280851 LOC109944860 LOC123043690 LOC123187485 LOC123051558 LOC123445342 LOC123440431 LOC123424715 LOC8075346 LOC8062704 LOC8059405 LOC100828492 LOC100832136 LOC100840605 CHLRE_01g040050v5
Function* thiamine pyrophosphokinase1 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1-like thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 2 thiamin pyrophosphokinase 1-like thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 2-like thiamine pyrophosphokinase 2-like thiamine pyrophosphokinase 1-like thiamine pyrophosphokinase 3-like thiamin pyrophosphokinase 1 thiamin pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 1-like thiamine pyrophosphokinase 3 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 1 thiamine pyrophosphokinase 3 thiamine pyrophosphokinase 2 thiamine pyrophosphokinase 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 3
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00910 Nitrogen metabolism 2
bra01310 Nitrogen cycle 2
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00561 Glycerolipid metabolism 3
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04075 Plant hormone signal transduction 2
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 4
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu01230 Biosynthesis of amino acids 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00071 Fatty acid degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00592 alpha-Linolenic acid metabolism 2
sbi00640 Propanoate metabolism 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00620 Pyruvate metabolism 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
cre04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839303 819084 103836640 103844552 106397835 106399572 106422916 107917361 107931208 107946087 102620459 100786303 100795320 100246863 7457944 7478836 11431566 101250050 102596818 107803471 107787643 142176147 4326288 4326818 4338566 100285737 100280851 109944860 123043690 123187485 123051558 123445342 123440431 123424715 8075346 8062704 8059405 100828492 100832136 100840605 5715547
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