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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   RSL4   root hair defective 6-like 4 
 ath-r.7   RSL4   root hair defective 6-like 4 
 ath-m.9   RSL4   root hair defective 6-like 4 
 ath-e.2   RSL4   root hair defective 6-like 4 
 ath-m.4.bio   RSL4   root hair defective 6-like 4 
 ath-m.4.hor   RSL4   root hair defective 6-like 4 
 ath-m.4.lig   RSL4   root hair defective 6-like 4 
 ath-m.4.str   RSL4   root hair defective 6-like 4 
 ath-m.4.tis   RSL4   root hair defective 6-like 4 
 ath-u.5   RSL2   ROOT HAIR DEFECTIVE 6-LIKE 2 
 mtr-u.5   11414212   transcription factor RSL2 
 mtr-u.5   11416220   transcription factor bHLH139 
 osa-u.5   4333457   transcription factor bHLH139-like 
 osa-u.5   107275987   transcription factor RSL3 
 zma-u.5   109942252   transcription factor bHLH129 

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Top 50 coexpressed genes to RSL4 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RSL4 (ath-u.5 coexpression data)

CoexMap"839667"


athRSL4 | Entrez gene ID : 839667      
Species ath mtr osa zma nta bna ppo gma tae sot bdi bra sbi hvu cit vvi cre sly ghi
Paralog 10 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048766 [list] [network] root hair initiation  (20 genes)  IMP  
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (262 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS TAS  
Protein NP_564293.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for NP_564293.1)
Subcellular
localization
TargetP
other 6  (predict for NP_564293.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
RSL4

.
ath-r.7
for
RSL4

.
ath-m.9
for
RSL4

.
ath-e.2
for
RSL4

.
ath-m.4.bio
for
RSL4

.
ath-m.4.hor
for
RSL4

.
ath-m.4.lig
for
RSL4

.
ath-m.4.str
for
RSL4

.
ath-m.4.tis
for
RSL4

.
ath-u.5
for
RSL2

.
mtr-u.5
for
11414212

.
mtr-u.5
for
11416220

.
osa-u.5
for
4333457

.
osa-u.5
for
107275987

.
zma-u.5
for
109942252

.


Ortholog ID: 638
Species ath osa sbi
Symbol RSL2 LOC107276337 LOC8074300
Function* ROOT HAIR DEFECTIVE 6-LIKE 2 transcription factor bHLH84 transcription factor bHLH85
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00250 Alanine, aspartate and glutamate metabolism 2
osa00520 Amino sugar and nucleotide sugar metabolism 2
osa01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829531 107276337 8074300
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