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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   nMAT1   Intron maturase, type II family protein 
 ath-r.7   nMAT1   Intron maturase, type II family protein 
 ath-m.9   nMAT1   Intron maturase, type II family protein 
 ath-e.2   nMAT1   Intron maturase, type II family protein 
 ath-m.4.bio   nMAT1   Intron maturase, type II family protein 
 ath-m.4.hor   nMAT1   Intron maturase, type II family protein 
 ath-m.4.lig   nMAT1   Intron maturase, type II family protein 
 ath-m.4.str   nMAT1   Intron maturase, type II family protein 
 ath-m.4.tis   nMAT1   Intron maturase, type II family protein 
 bra-r.6   103840440   nuclear intron maturase 1, mitochondrial 
 bna-r.1   106424991   nuclear intron maturase 1, mitochondrial 
 bna-r.1   106367367   nuclear intron maturase 1, mitochondrial-like 
 ghi-r.1   107922910   nuclear intron maturase 1, mitochondrial 
 ghi-r.1   107934595   nuclear intron maturase 1, mitochondrial 
 cit-r.1   102615651   nuclear intron maturase 1, mitochondrial 
 gma-u.5   100810812   nuclear intron maturase 1, mitochondrial 
 vvi-u.5   100252074   nuclear intron maturase 1, mitochondrial 
 ppo-u.5   112327186   nuclear intron maturase 1, mitochondrial 
 mtr-u.5   112419501   nuclear intron maturase 1, mitochondrial 
 sly-u.5   101252126   nuclear intron maturase 1, mitochondrial 
 sot-r.1   102580267   uncharacterized mitochondrial protein ymf11 
 nta-r.1   107829215   nuclear intron maturase 1, mitochondrial-like 
 nta-r.1   107809420   nuclear intron maturase 1, mitochondrial-like 
 zma-u.5   103631821   Intron maturase type II family protein 
 tae-r.2   123159551   nuclear intron maturase 1, mitochondrial 
 tae-r.2   123171145   nuclear intron maturase 1, mitochondrial 
 tae-r.2   123147897   nuclear intron maturase 1, mitochondrial 
 hvu-r.1   123411510   nuclear intron maturase 1, mitochondrial 
 sbi-r.1   8081999   uncharacterized LOC8081999 
 bdi-r.1   100829660   nuclear intron maturase 1, mitochondrial 

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Top 50 coexpressed genes to nMAT1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to nMAT1 (ath-u.5 coexpression data)

CoexMap"839880"


athnMAT1 | Entrez gene ID : 839880      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi cre osa
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000374 [list] [network] Group III intron splicing  (1 genes)  IMP  
GO:0010896 [list] [network] regulation of triglyceride catabolic process  (2 genes)  IMP  
GO:0090615 [list] [network] mitochondrial mRNA processing  (11 genes)  IMP  
GO:0006521 [list] [network] regulation of amino acid metabolic process  (17 genes)  IMP  
GO:2001006 [list] [network] regulation of cellulose biosynthetic process  (20 genes)  IMP  
GO:0000373 [list] [network] Group II intron splicing  (28 genes)  IMP  
GO:0032885 [list] [network] regulation of polysaccharide biosynthetic process  (34 genes)  IMP  
GO:0007005 [list] [network] mitochondrion organization  (60 genes)  IMP  
GO:0009845 [list] [network] seed germination  (111 genes)  IMP  
GO:0090351 [list] [network] seedling development  (137 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_174294.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 3  (predict for NP_174294.1)
Subcellular
localization
TargetP
other 4  (predict for NP_174294.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
nMAT1
ath-r.7
for
nMAT1
ath-m.9
for
nMAT1
ath-e.2
for
nMAT1
ath-m.4.bio
for
nMAT1
ath-m.4.hor
for
nMAT1
ath-m.4.lig
for
nMAT1
ath-m.4.str
for
nMAT1
ath-m.4.tis
for
nMAT1
bra-r.6
for
103840440
bna-r.1
for
106424991
bna-r.1
for
106367367
ghi-r.1
for
107922910
ghi-r.1
for
107934595
cit-r.1
for
102615651
gma-u.5
for
100810812
vvi-u.5
for
100252074
ppo-u.5
for
112327186
mtr-u.5
for
112419501
sly-u.5
for
101252126
sot-r.1
for
102580267
nta-r.1
for
107829215
nta-r.1
for
107809420
zma-u.5
for
103631821
tae-r.2
for
123159551
tae-r.2
for
123171145
tae-r.2
for
123147897
hvu-r.1
for
123411510
sbi-r.1
for
8081999
bdi-r.1
for
100829660


Ortholog ID: 11491
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta zma tae tae tae hvu sbi bdi
Symbol nMAT1 LOC103840440 LOC106424991 LOC106367367 LOC107922910 LOC107934595 LOC102615651 LOC100810812 LOC100252074 LOC112327186 LOC112419501 LOC101252126 LOC102580267 LOC107829215 LOC107809420 LOC103631821 LOC123159551 LOC123171145 LOC123147897 LOC123411510 LOC8081999 LOC100829660
Function* Intron maturase, type II family protein nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial-like nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial uncharacterized mitochondrial protein ymf11 nuclear intron maturase 1, mitochondrial-like nuclear intron maturase 1, mitochondrial-like Intron maturase type II family protein nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial nuclear intron maturase 1, mitochondrial uncharacterized LOC8081999 nuclear intron maturase 1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi00270 Cysteine and methionine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00240 Pyrimidine metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839880 103840440 106424991 106367367 107922910 107934595 102615651 100810812 100252074 112327186 112419501 101252126 102580267 107829215 107809420 103631821 123159551 123171145 123147897 123411510 8081999 100829660
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