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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PER1   1-cysteine peroxiredoxin 1 
 ath-r.7   PER1   1-cysteine peroxiredoxin 1 
 ath-m.9   PER1   1-cysteine peroxiredoxin 1 
 ath-e.2   PER1   1-cysteine peroxiredoxin 1 
 ath-m.4.bio   PER1   1-cysteine peroxiredoxin 1 
 ath-m.4.hor   PER1   1-cysteine peroxiredoxin 1 
 ath-m.4.lig   PER1   1-cysteine peroxiredoxin 1 
 ath-m.4.str   PER1   1-cysteine peroxiredoxin 1 
 ath-m.4.tis   PER1   1-cysteine peroxiredoxin 1 
 bra-r.6   103868452   1-Cys peroxiredoxin PER1 
 bra-r.6   103868693   1-Cys peroxiredoxin PER1 
 bna-r.1   125575621   1-Cys peroxiredoxin PER1-like 
 bna-r.1   106451802   1-Cys peroxiredoxin PER1 
 bna-r.1   106360598   1-Cys peroxiredoxin PER1-like 
 ghi-r.1   107916248   1-Cys peroxiredoxin 
 ghi-r.1   107896588   1-Cys peroxiredoxin 
 gma-u.5   100820616   1-Cys peroxiredoxin 
 vvi-u.5   100259564   1-Cys peroxiredoxin 
 sly-u.5   101260517   1-Cys peroxiredoxin A 
 osa-u.5   4344045   1-Cys peroxiredoxin A-like 
 osa-u.5   4344046   1-Cys peroxiredoxin B-like 
 zma-u.5   100037830   1-Cys peroxiredoxin antioxidant 
 tae-r.2   543108   1-Cys peroxiredoxin PER1-like 
 tae-r.2   100415869   1-Cys peroxiredoxin PER1 
 bdi-r.1   100821892   1-Cys peroxiredoxin PER1 

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Top 50 coexpressed genes to PER1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PER1 (ath-u.5 coexpression data)

CoexMap"841231"


athPER1 | Entrez gene ID : 841231      
Species ath bra bna ghi gma vvi sly osa zma tae bdi cit mtr ppo hvu nta cre sot sbi
Paralog 9 2 3 2 1 1 1 2 1 2 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00480 [list] [network] Glutathione metabolism (102 genes)
ath00940 [list] [network] Phenylpropanoid biosynthesis (127 genes)
GO BP
GO:0010231 [list] [network] maintenance of seed dormancy  (9 genes)  TAS  
GO:0009269 [list] [network] response to desiccation  (24 genes)  TAS  
GO:0098869 [list] [network] cellular oxidant detoxification  (26 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008379 [list] [network] thioredoxin peroxidase activity  (2 genes)  ISS  
Protein NP_175247.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 7,  cyto 1,  extr 1,  golg 1,  cyto_nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_175247.1)
Subcellular
localization
TargetP
other 9  (predict for NP_175247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PER1
ath-r.7
for
PER1
ath-m.9
for
PER1
ath-e.2
for
PER1
ath-m.4.bio
for
PER1
ath-m.4.hor
for
PER1
ath-m.4.lig
for
PER1
ath-m.4.str
for
PER1
ath-m.4.tis
for
PER1
bra-r.6
for
103868452
bra-r.6
for
103868693
bna-r.1
for
125575621
bna-r.1
for
106451802
bna-r.1
for
106360598
ghi-r.1
for
107916248
ghi-r.1
for
107896588
gma-u.5
for
100820616
vvi-u.5
for
100259564
sly-u.5
for
101260517
osa-u.5
for
4344045
osa-u.5
for
4344046
zma-u.5
for
100037830
tae-r.2
for
543108
tae-r.2
for
100415869
bdi-r.1
for
100821892


Ortholog ID: 9828
Species ath bra bra bna bna bna ghi ghi gma vvi sly osa osa zma tae tae bdi
Symbol PER1 LOC103868452 LOC103868693 LOC125575621 LOC106451802 LOC106360598 LOC107916248 LOC107896588 LOC100820616 LOC100259564 LOC101260517 LOC4344045 LOC4344046 LOC100037830 LOC543108 LOC100415869 LOC100821892
Function* 1-cysteine peroxiredoxin 1 1-Cys peroxiredoxin PER1 1-Cys peroxiredoxin PER1 1-Cys peroxiredoxin PER1-like 1-Cys peroxiredoxin PER1 1-Cys peroxiredoxin PER1-like 1-Cys peroxiredoxin 1-Cys peroxiredoxin 1-Cys peroxiredoxin 1-Cys peroxiredoxin 1-Cys peroxiredoxin A 1-Cys peroxiredoxin A-like 1-Cys peroxiredoxin B-like 1-Cys peroxiredoxin antioxidant 1-Cys peroxiredoxin PER1-like 1-Cys peroxiredoxin PER1 1-Cys peroxiredoxin PER1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
bra00940 Phenylpropanoid biosynthesis 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
bra00940 Phenylpropanoid biosynthesis 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00480 Glutathione metabolism 3
bna00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00010 Glycolysis / Gluconeogenesis 5
ghi00710 Carbon fixation by Calvin cycle 5
ghi01230 Biosynthesis of amino acids 5
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00010 Glycolysis / Gluconeogenesis 5
ghi00710 Carbon fixation by Calvin cycle 5
ghi01230 Biosynthesis of amino acids 5
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 2
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 2
tae00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841231 103868452 103868693 125575621 106451802 106360598 107916248 107896588 100820616 100259564 101260517 4344045 4344046 100037830 543108 100415869 100821892
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