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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   delta-ADR   delta-adaptin 
 ath-r.7   delta-ADR   delta-adaptin 
 ath-m.9   delta-ADR   delta-adaptin 
 ath-e.2   delta-ADR   delta-adaptin 
 ath-m.4.bio   delta-ADR   delta-adaptin 
 ath-m.4.hor   delta-ADR   delta-adaptin 
 ath-m.4.lig   delta-ADR   delta-adaptin 
 ath-m.4.str   delta-ADR   delta-adaptin 
 ath-m.4.tis   delta-ADR   delta-adaptin 
 gma-u.5   100815221   AP-3 complex subunit delta 
 gma-u.5   100783052   AP-3 complex subunit delta 
 vvi-u.5   100261087   AP-3 complex subunit delta 
 ppo-u.5   7475640   AP-3 complex subunit delta 
 ppo-u.5   7493516   AP-3 complex subunit delta 
 mtr-u.5   11412204   AP-3 complex subunit delta 
 sly-u.5   101265218   AP-3 complex subunit delta 
 osa-u.5   4324036   AP-3 complex subunit delta 
 zma-u.5   103640942   AP-3 complex subunit delta 
 zma-u.5   100279859   AP-3 complex subunit delta 

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Top 50 coexpressed genes to delta-ADR (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to delta-ADR (ath-u.5 coexpression data)

CoexMap"841298"


athdelta-ADR | Entrez gene ID : 841298      
Species ath gma vvi ppo mtr sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 9 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04142 [list] [network] Lysosome (82 genes)
GO BP
GO:0006903 [list] [network] vesicle targeting  (2 genes)  IEP  
GO:0080171 [list] [network] lytic vacuole organization  (5 genes)  IMP  
GO:1990019 [list] [network] protein storage vacuole organization  (7 genes)  IMP  
GO:0007032 [list] [network] endosome organization  (9 genes)  IMP  
GO:0006886 [list] [network] intracellular protein transport  (149 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031156.1 [sequence] [blastp]
NP_175308.1 [sequence] [blastp]
NP_849785.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 2  (predict for NP_001031156.1)
cyto 5,  nucl 3,  chlo 2  (predict for NP_175308.1)
cyto 5,  nucl 3,  chlo 2  (predict for NP_849785.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001031156.1)
other 7  (predict for NP_175308.1)
other 7  (predict for NP_849785.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
delta-ADR

.
ath-r.7
for
delta-ADR

.
ath-m.9
for
delta-ADR

.
ath-e.2
for
delta-ADR

.
ath-m.4.bio
for
delta-ADR

.
ath-m.4.hor
for
delta-ADR

.
ath-m.4.lig
for
delta-ADR

.
ath-m.4.str
for
delta-ADR

.
ath-m.4.tis
for
delta-ADR

.
gma-u.5
for
100815221

.
gma-u.5
for
100783052

.
vvi-u.5
for
100261087

.
ppo-u.5
for
7475640

.
ppo-u.5
for
7493516

.
mtr-u.5
for
11412204

.
sly-u.5
for
101265218

.
osa-u.5
for
4324036

.
zma-u.5
for
103640942

.
zma-u.5
for
100279859

.


Ortholog ID: 7834
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol delta-ADR LOC100815221 LOC100783052 LOC101265218 LOC4324036 LOC100279859 LOC103640942 LOC103869581 LOC103868668 LOC100261087 LOC7493516 LOC7475640 LOC11412204 LOC123127823 LOC123181621 LOC123438595 LOC107931021 LOC121224440 LOC125608975 LOC111215632 LOC8066348 LOC102585437 LOC102611509 LOC100830317 LOC107778160 LOC107804890
Function* delta-adaptin AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta-like AP-3 complex subunit delta-like AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta AP-3 complex subunit delta-like AP-3 complex subunit delta-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00510 N-Glycan biosynthesis 4
zma04141 Protein processing in endoplasmic reticulum 4
zma00513 Various types of N-glycan biosynthesis 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma00510 N-Glycan biosynthesis 4
zma00513 Various types of N-glycan biosynthesis 2
zma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 3
bra04144 Endocytosis 3
bra03040 Spliceosome 3
bra05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
ghi04142 Lysosome 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
ghi04142 Lysosome 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 9
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 9
bna00514 Other types of O-glycan biosynthesis 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841298 100815221 100783052 101265218 4324036 100279859 103640942 103869581 103868668 100261087 7493516 7475640 11412204 123127823 123181621 123438595 107931021 121224440 125608975 111215632 8066348 102585437 102611509 100830317 107778160 107804890
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