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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   ZOU-2   bHLH transcription factor ZOU-2 
 vvi-u.5   100266006   transcription factor bHLH95 
 osa-u.5   4335858   transcription factor bHLH95 
 osa-u.5   4335859   transcription factor bHLH95 
 zma-u.5   Opaque11   Opaque endosperm 11 

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Top 50 coexpressed genes to ZOU-2 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ZOU-2 (gma-u.5 coexpression data)

CoexMap"841400"


athRGE1 | Entrez gene ID : 841400      
Species gma vvi osa zma bdi mtr bra hvu cit bna ath ppo sbi sly ghi sot nta cre tae
Paralog 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048317 [list] [network] seed morphogenesis  (11 genes)  IGI IMP  
GO:0010115 [list] [network] regulation of abscisic acid biosynthetic process  (19 genes)  IMP  
GO:0009960 [list] [network] endosperm development  (35 genes)  IGI  
GO:0010162 [list] [network] seed dormancy process  (42 genes)  IGI IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (446 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_175399.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for NP_175399.2)
Subcellular
localization
TargetP
other 8  (predict for NP_175399.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

gma-u.5
for
ZOU-2
vvi-u.5
for
100266006
osa-u.5
for
4335858
osa-u.5
for
4335859
zma-u.5
for
Opaque11


Ortholog ID: 3060
Species bra ghi ghi gma vvi osa zma tae tae bdi bdi
Symbol LOC103868796 LOC107894279 LOC121212214 ZOU-2 LOC100266006 LOC4335858 Opaque11 LOC123133804 LOC123130357 LOC100822559 LOC100821939
Function* transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95 bHLH transcription factor ZOU-2 transcription factor bHLH95 transcription factor bHLH95 Opaque endosperm 11 transcription factor bHLH95-like transcription factor bHLH95 transcription factor bHLH95 transcription factor bHLH95
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00051 Fructose and mannose metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103868796 107894279 121212214 100810704 100266006 4335858 109851609 123133804 123130357 100822559 100821939
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