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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-r.7   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.9   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-e.2   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.4.bio   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.4.hor   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.4.lig   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.4.str   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 ath-m.4.tis   CRR41   potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein 
 bra-r.6   103871303   uncharacterized LOC103871303 
 bna-r.1   125610084   uncharacterized LOC125610084 
 ghi-r.1   107918688   uncharacterized LOC107918688 
 ghi-r.1   107895195   uncharacterized LOC107895195 
 cit-r.1   102631151   hypothetical protein 
 gma-u.5   100811126   uncharacterized LOC100811126 
 gma-u.5   100804209   uncharacterized LOC100804209 
 vvi-u.5   100258940   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 ppo-u.5   7470927   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 mtr-u.5   11426355   uncharacterized LOC11426355 
 sly-u.5   104648556   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 sot-r.1   102601546   uncharacterized LOC102601546 
 nta-r.1   107794473   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 nta-r.1   107766654   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 osa-u.5   4325517   protein CHLORORESPIRATORY REDUCTION 41, chloroplastic 
 zma-u.5   103651360   Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 
 tae-r.2   123078990   uncharacterized LOC123078990 
 tae-r.2   123070585   uncharacterized LOC123070585 
 tae-r.2   123061895   uncharacterized LOC123061895 
 hvu-r.1   123440089   uncharacterized LOC123440089 
 sbi-r.1   8068012   uncharacterized LOC8068012 
 bdi-r.1   100835227   uncharacterized LOC100835227 

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Top 50 coexpressed genes to CRR41 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CRR41 (ath-u.5 coexpression data)

CoexMap"841533"


athCRR41 | Entrez gene ID : 841533      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 1 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010258 [list] [network] NADH dehydrogenase complex (plastoquinone) assembly  (8 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_564582.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for NP_564582.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564582.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
CRR41
ath-r.7
for
CRR41
ath-m.9
for
CRR41
ath-e.2
for
CRR41
ath-m.4.bio
for
CRR41
ath-m.4.hor
for
CRR41
ath-m.4.lig
for
CRR41
ath-m.4.str
for
CRR41
ath-m.4.tis
for
CRR41
bra-r.6
for
103871303
bna-r.1
for
125610084
ghi-r.1
for
107918688
ghi-r.1
for
107895195
cit-r.1
for
102631151
gma-u.5
for
100811126
gma-u.5
for
100804209
vvi-u.5
for
100258940
ppo-u.5
for
7470927
mtr-u.5
for
11426355
sly-u.5
for
104648556
sot-r.1
for
102601546
nta-r.1
for
107794473
nta-r.1
for
107766654
osa-u.5
for
4325517
zma-u.5
for
103651360
tae-r.2
for
123078990
tae-r.2
for
123070585
tae-r.2
for
123061895
hvu-r.1
for
123440089
sbi-r.1
for
8068012
bdi-r.1
for
100835227


Ortholog ID: 11085
Species ath bra bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol CRR41 LOC103871303 LOC125610084 LOC107918688 LOC107895195 LOC102631151 LOC100811126 LOC100804209 LOC100258940 LOC7470927 LOC11426355 LOC104648556 LOC102601546 LOC107794473 LOC107766654 LOC4325517 LOC103651360 LOC123078990 LOC123070585 LOC123061895 LOC123440089 LOC8068012 LOC100835227
Function* potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel protein uncharacterized LOC103871303 uncharacterized LOC125610084 uncharacterized LOC107918688 uncharacterized LOC107895195 hypothetical protein uncharacterized LOC100811126 uncharacterized LOC100804209 protein CHLORORESPIRATORY REDUCTION 41, chloroplastic protein CHLORORESPIRATORY REDUCTION 41, chloroplastic uncharacterized LOC11426355 protein CHLORORESPIRATORY REDUCTION 41, chloroplastic uncharacterized LOC102601546 protein CHLORORESPIRATORY REDUCTION 41, chloroplastic protein CHLORORESPIRATORY REDUCTION 41, chloroplastic protein CHLORORESPIRATORY REDUCTION 41, chloroplastic Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 uncharacterized LOC123078990 uncharacterized LOC123070585 uncharacterized LOC123061895 uncharacterized LOC123440089 uncharacterized LOC8068012 uncharacterized LOC100835227
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 9
bna01200 Carbon metabolism 9
bna00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841533 103871303 125610084 107918688 107895195 102631151 100811126 100804209 100258940 7470927 11426355 104648556 102601546 107794473 107766654 4325517 103651360 123078990 123070585 123061895 123440089 8068012 100835227
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