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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G52220   CURVATURE THYLAKOID protein 
 ath-r.7   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.9   AT1G52220   CURVATURE THYLAKOID protein 
 ath-e.2   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.4.bio   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.4.hor   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.4.lig   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.4.str   AT1G52220   CURVATURE THYLAKOID protein 
 ath-m.4.tis   AT1G52220   CURVATURE THYLAKOID protein 
 bra-r.6   103871228   protein CURVATURE THYLAKOID 1C, chloroplastic 
 bna-r.1   106390577   protein CURVATURE THYLAKOID 1C, chloroplastic-like 
 bna-r.1   125588733   protein CURVATURE THYLAKOID 1C, chloroplastic-like 
 ghi-r.1   107914096   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ghi-r.1   107895676   protein CURVATURE THYLAKOID 1C, chloroplastic 
 cit-r.1   102617418   protein CURVATURE THYLAKOID 1C, chloroplastic 
 gma-u.5   100306487   protein CURVATURE THYLAKOID 1C-like 
 gma-u.5   100305776   uncharacterized LOC100305776 
 vvi-u.5   100258354   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ppo-u.5   7470562   protein CURVATURE THYLAKOID 1C, chloroplastic 
 ppo-u.5   7483535   protein CURVATURE THYLAKOID 1C, chloroplastic 
 mtr-u.5   25491409   protein CURVATURE THYLAKOID 1C, chloroplastic 
 sly-u.5   101249276   protein CURVATURE THYLAKOID 1C, chloroplastic 
 sot-r.1   102606339   protein CURVATURE THYLAKOID 1C, chloroplastic 
 nta-r.1   107830633   protein CURVATURE THYLAKOID 1C, chloroplastic-like 
 nta-r.1   107800499   protein CURVATURE THYLAKOID 1C, chloroplastic 
 osa-u.5   4327018   protein CURVATURE THYLAKOID 1C, chloroplastic 
 zma-u.5   103636627   protein CURVATURE THYLAKOID 1C, chloroplastic 
 tae-r.2   123062125   protein CURVATURE THYLAKOID 1C, chloroplastic 
 tae-r.2   123070851   protein CURVATURE THYLAKOID 1C, chloroplastic 
 tae-r.2   123079239   protein CURVATURE THYLAKOID 1C, chloroplastic 
 hvu-r.1   123444465   protein CURVATURE THYLAKOID 1C, chloroplastic-like 
 sbi-r.1   8079228   protein CURVATURE THYLAKOID 1C, chloroplastic 
 bdi-r.1   100826133   protein CURVATURE THYLAKOID 1C, chloroplastic 

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Top 50 coexpressed genes to AT1G52220 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G52220 (ath-u.5 coexpression data)

CoexMap"841652"


athAT1G52220 | Entrez gene ID : 841652      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001031173.1 [sequence] [blastp]
NP_001077703.1 [sequence] [blastp]
NP_001322106.1 [sequence] [blastp]
NP_564603.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  mito 1  (predict for NP_001031173.1)
chlo 6,  mito 4  (predict for NP_001077703.1)
chlo 6,  mito 2,  extr 1,  vacu 1,  golg 1  (predict for NP_001322106.1)
chlo 7,  mito 1,  extr 1,  golg 1,  cyto_mito 1,  mito_plas 1  (predict for NP_564603.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001031173.1)
chlo 9  (predict for NP_001077703.1)
chlo 9  (predict for NP_001322106.1)
chlo 9  (predict for NP_564603.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G52220
ath-r.7
for
AT1G52220
ath-m.9
for
AT1G52220
ath-e.2
for
AT1G52220
ath-m.4.bio
for
AT1G52220
ath-m.4.hor
for
AT1G52220
ath-m.4.lig
for
AT1G52220
ath-m.4.str
for
AT1G52220
ath-m.4.tis
for
AT1G52220
bra-r.6
for
103871228
bna-r.1
for
106390577
bna-r.1
for
125588733
ghi-r.1
for
107914096
ghi-r.1
for
107895676
cit-r.1
for
102617418
gma-u.5
for
100306487
gma-u.5
for
100305776
vvi-u.5
for
100258354
ppo-u.5
for
7470562
ppo-u.5
for
7483535
mtr-u.5
for
25491409
sly-u.5
for
101249276
sot-r.1
for
102606339
nta-r.1
for
107830633
nta-r.1
for
107800499
osa-u.5
for
4327018
zma-u.5
for
103636627
tae-r.2
for
123062125
tae-r.2
for
123070851
tae-r.2
for
123079239
hvu-r.1
for
123444465
sbi-r.1
for
8079228
bdi-r.1
for
100826133


Ortholog ID: 10513
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT1G52220 LOC103871228 LOC106390577 LOC125588733 LOC107914096 LOC107895676 LOC102617418 LOC100306487 LOC100305776 LOC100258354 LOC7470562 LOC7483535 LOC25491409 LOC101249276 LOC102606339 LOC107830633 LOC107800499 LOC4327018 LOC103636627 LOC123062125 LOC123070851 LOC123079239 LOC123444465 LOC8079228 LOC100826133
Function* CURVATURE THYLAKOID protein protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C-like uncharacterized LOC100305776 protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic-like protein CURVATURE THYLAKOID 1C, chloroplastic protein CURVATURE THYLAKOID 1C, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 11
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 3
gma00195 Photosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 11
vvi00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 4
ppo01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr03010 Ribosome 4
mtr00710 Carbon fixation by Calvin cycle 3
mtr01230 Biosynthesis of amino acids 3
mtr00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 4
sly00630 Glyoxylate and dicarboxylate metabolism 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 4
sot00010 Glycolysis / Gluconeogenesis 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 5
nta00190 Oxidative phosphorylation 3
nta03010 Ribosome 2
nta00260 Glycine, serine and threonine metabolism 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 4
osa00710 Carbon fixation by Calvin cycle 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 6
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 11
tae01200 Carbon metabolism 11
tae00195 Photosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu00710 Carbon fixation by Calvin cycle 5
hvu00196 Photosynthesis - antenna proteins 4
hvu01230 Biosynthesis of amino acids 4
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 6
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi00910 Nitrogen metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841652 103871228 106390577 125588733 107914096 107895676 102617418 100306487 100305776 100258354 7470562 7483535 25491409 101249276 102606339 107830633 107800499 4327018 103636627 123062125 123070851 123079239 123444465 8079228 100826133
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