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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   MMH-1   MUTM homolog-1 
 ath-r.7   MMH-1   MUTM homolog-1 
 ath-m.9   MMH-1   MUTM homolog-1 
 ath-e.2   MMH-1   MUTM homolog-1 
 ath-m.4.bio   MMH-1   MUTM homolog-1 
 ath-m.4.hor   MMH-1   MUTM homolog-1 
 ath-m.4.lig   MMH-1   MUTM homolog-1 
 ath-m.4.str   MMH-1   MUTM homolog-1 
 ath-m.4.tis   MMH-1   MUTM homolog-1 
 gma-u.5   100806161   formamidopyrimidine-DNA glycosylase 
 vvi-u.5   100258664   formamidopyrimidine-DNA glycosylase 
 vvi-u.5   100261209   formamidopyrimidine-DNA glycosylase 
 ppo-u.5   18096694   formamidopyrimidine-DNA glycosylase 
 mtr-u.5   11435290   formamidopyrimidine-DNA glycosylase 
 sly-u.5   101258844   formamidopyrimidine-DNA glycosylase 
 osa-u.5   4341640   formamidopyrimidine-DNA glycosylase 
 osa-u.5   4345225   formamidopyrimidine-DNA glycosylase 
 zma-u.5   100273102   uncharacterized LOC100273102 

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Top 50 coexpressed genes to MMH-1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MMH-1 (ath-u.5 coexpression data)

CoexMap"841681"


athMMH-1 | Entrez gene ID : 841681      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03410 [list] [network] Base excision repair (50 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (203 genes)  IDA  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0019104 [list] [network] DNA N-glycosylase activity  (19 genes)  IDA ISS  
Protein NP_001322993.1 [sequence] [blastp]
NP_001322994.1 [sequence] [blastp]
NP_001322995.1 [sequence] [blastp]
NP_564608.1 [sequence] [blastp]
NP_849798.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 8,  cyto 1  (predict for NP_001322993.1)
cysk 9,  chlo 1,  cyto 1  (predict for NP_001322994.1)
cyto 3,  chlo 2,  plas 2,  cyto_nucl 2  (predict for NP_001322995.1)
nucl 5,  cyto 4  (predict for NP_564608.1)
cysk 8,  cyto 1  (predict for NP_849798.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001322993.1)
other 8  (predict for NP_001322994.1)
other 8  (predict for NP_001322995.1)
other 8  (predict for NP_564608.1)
other 8  (predict for NP_849798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
MMH-1
ath-r.7
for
MMH-1
ath-m.9
for
MMH-1
ath-e.2
for
MMH-1
ath-m.4.bio
for
MMH-1
ath-m.4.hor
for
MMH-1
ath-m.4.lig
for
MMH-1
ath-m.4.str
for
MMH-1
ath-m.4.tis
for
MMH-1
gma-u.5
for
100806161
vvi-u.5
for
100258664
vvi-u.5
for
100261209
ppo-u.5
for
18096694
mtr-u.5
for
11435290
sly-u.5
for
101258844
osa-u.5
for
4341640
osa-u.5
for
4345225
zma-u.5
for
100273102


Ortholog ID: 7072
Species ath bra bna bna ghi cit gma vvi vvi ppo mtr sly sot nta nta osa osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol MMH-1 LOC103868500 LOC106445720 LOC106406040 LOC107914186 LOC102621076 LOC100806161 LOC100261209 LOC100258664 LOC18096694 LOC11435290 LOC101258844 LOC102584467 LOC107824922 LOC107790249 LOC4341640 LOC4345225 LOC100273102 LOC123051038 LOC123186976 LOC123410483 LOC123424347 LOC8058397 LOC110437057 LOC100825943 LOC100833637 CHLRE_10g428433v5
Function* MUTM homolog-1 formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase uncharacterized LOC100273102 formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase-like formamidopyrimidine-DNA glycosylase formamidopyrimidine-DNA glycosylase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 5
ath03410 Base excision repair 5
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 3
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 2
vvi03013 Nucleocytoplasmic transport 2
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 4
sot03008 Ribosome biogenesis in eukaryotes 2
sot03030 DNA replication 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 4
tae00270 Cysteine and methionine metabolism 3
tae03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 4
bdi00260 Glycine, serine and threonine metabolism 3
bdi00270 Cysteine and methionine metabolism 3
bdi01200 Carbon metabolism 3
bdi00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00330 Arginine and proline metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841681 103868500 106445720 106406040 107914186 102621076 100806161 100261209 100258664 18096694 11435290 101258844 102584467 107824922 107790249 4341640 4345225 100273102 123051038 123186976 123410483 123424347 8058397 110437057 100825943 100833637 5728140
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