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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-r.7   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.9   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-e.2   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.4.bio   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.4.hor   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.4.lig   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.4.str   AT1G53790   F-box and associated interaction domains-containing protein 
 ath-m.4.tis   AT1G53790   F-box and associated interaction domains-containing protein 

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Top 50 coexpressed genes to AT1G53790 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G53790 (ath-u.5 coexpression data)

CoexMap"841816"


athAT1G53790 | Entrez gene ID : 841816      
Species ath tae mtr osa zma bdi vvi sbi ppo bna sly nta cre sot hvu ghi gma cit bra
Paralog 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001117485.1 [sequence] [blastp]
NP_001322774.1 [sequence] [blastp]
NP_175782.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 2,  plas 2,  cyto_plas 2,  chlo 1,  cysk 1,  cyto_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001117485.1)
cyto 2,  plas 2,  cyto_plas 2,  chlo 1,  cysk 1,  cyto_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1,  cyto_E.R. 1  (predict for NP_001322774.1)
plas 2,  cysk 2,  cysk_plas 2,  chlo 1,  cyto 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1  (predict for NP_175782.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001117485.1)
other 9  (predict for NP_001322774.1)
other 9  (predict for NP_175782.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G53790

.
ath-r.7
for
AT1G53790

.
ath-m.9
for
AT1G53790

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ath-e.2
for
AT1G53790

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ath-m.4.bio
for
AT1G53790

.
ath-m.4.hor
for
AT1G53790

.
ath-m.4.lig
for
AT1G53790

.
ath-m.4.str
for
AT1G53790

.
ath-m.4.tis
for
AT1G53790

.


Ortholog ID: 23122
Species ath bra bna bna
Symbol AT1G53790 LOC103848516 LOC106348207 LOC125597394
Function* F-box and associated interaction domains-containing protein F-box protein At1g53790 F-box protein At1g53790-like F-box protein At1g53790-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra03050 Proteasome 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841816 103848516 106348207 125597394
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