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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-r.7   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.9   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-e.2   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.4.bio   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.4.hor   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.4.lig   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.4.str   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 ath-m.4.tis   AT1G55000   peptidoglycan-binding LysM domain-containing protein 
 gma-u.5   100803417   F-box protein At1g55000-like 
 gma-u.5   100783874   F-box protein At1g55000 
 vvi-u.5   100242661   F-box protein At1g55000 
 ppo-u.5   7473286   F-box protein At1g55000 
 mtr-u.5   11440777   F-box protein At1g55000 
 sly-u.5   101243744   F-box protein At1g55000 
 osa-u.5   4333817   F-box protein At1g55000 
 zma-u.5   100284442   uncharacterized LOC100284442 

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Top 50 coexpressed genes to AT1G55000 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G55000 (ath-u.5 coexpression data)

CoexMap"841942"


athAT1G55000 | Entrez gene ID : 841942      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001031192.1 [sequence] [blastp]
NP_001031193.1 [sequence] [blastp]
NP_564673.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_001031192.1)
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_001031193.1)
chlo 6,  cyto 2,  vacu 1,  cyto_nucl 1  (predict for NP_564673.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031192.1)
scret 9  (predict for NP_001031193.1)
scret 9  (predict for NP_564673.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G55000
ath-r.7
for
AT1G55000
ath-m.9
for
AT1G55000
ath-e.2
for
AT1G55000
ath-m.4.bio
for
AT1G55000
ath-m.4.hor
for
AT1G55000
ath-m.4.lig
for
AT1G55000
ath-m.4.str
for
AT1G55000
ath-m.4.tis
for
AT1G55000
gma-u.5
for
100803417
gma-u.5
for
100783874
vvi-u.5
for
100242661
ppo-u.5
for
7473286
mtr-u.5
for
11440777
sly-u.5
for
101243744
osa-u.5
for
4333817
zma-u.5
for
100284442


Ortholog ID: 9848
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu hvu sbi bdi cre
Symbol AT1G55000 LOC103848274 LOC106382437 LOC125589872 LOC107894387 LOC107899111 LOC102620797 LOC100783874 LOC100803417 LOC100242661 LOC7473286 LOC11440777 LOC101243744 LOC102587889 LOC107806326 LOC107802784 LOC4333817 LOC100284442 LOC123087173 LOC123090792 LOC123451029 LOC123428596 LOC8066027 LOC100841079 CHLRE_16g667100v5
Function* peptidoglycan-binding LysM domain-containing protein F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000-like F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000-like F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000-like F-box protein At1g55000 F-box protein At1g55000 uncharacterized LOC100284442 F-box protein At1g55000 F-box protein At1g55000 F-box protein At1g55000 uncharacterized LOC123428596 F-box protein At1g55000 F-box protein At1g55000 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 3
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
gma03250 Viral life cycle - HIV-1 2
gma03272 Virion - Hepatitis viruses 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 4
nta04070 Phosphatidylinositol signaling system 4
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
osa00543 Exopolysaccharide biosynthesis 2
osa00920 Sulfur metabolism 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841942 103848274 106382437 125589872 107894387 107899111 102620797 100783874 100803417 100242661 7473286 11440777 101243744 102587889 107806326 107802784 4333817 100284442 123087173 123090792 123451029 123428596 8066027 100841079 5717686
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