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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PLDEPSILON   phospholipase D alpha 4 
 ath-r.7   PLDEPSILON   phospholipase D alpha 4 
 ath-m.9   PLDEPSILON   phospholipase D alpha 4 
 ath-e.2   PLDEPSILON   phospholipase D alpha 4 
 ath-m.4.bio   PLDEPSILON   phospholipase D alpha 4 
 ath-m.4.hor   PLDEPSILON   phospholipase D alpha 4 
 ath-m.4.lig   PLDEPSILON   phospholipase D alpha 4 
 ath-m.4.str   PLDEPSILON   phospholipase D alpha 4 
 ath-m.4.tis   PLDEPSILON   phospholipase D alpha 4 
 bra-r.6   103871055   phospholipase D alpha 4 
 bna-r.1   106345757   phospholipase D alpha 4 
 ghi-r.1   107950668   phospholipase D alpha 4 
 ghi-r.1   107951929   phospholipase D alpha 4 
 gma-u.5   100807431   phospholipase D alpha 4 
 gma-u.5   100812642   phospholipase D alpha 4 
 gma-u.5   100789235   phospholipase D alpha 4 
 vvi-u.5   100256679   phospholipase D alpha 4 
 ppo-u.5   18096739   phospholipase D alpha 4 
 mtr-u.5   25500438   phospholipase D alpha 4 
 mtr-u.5   11429900   phospholipase D alpha 4 
 sot-r.1   102591861   phospholipase D alpha 4 
 nta-r.1   107761687   phospholipase D alpha 4-like 
 nta-r.1   107792301   phospholipase D alpha 4-like 

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Top 50 coexpressed genes to PLDEPSILON (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PLDEPSILON (ath-u.5 coexpression data)

CoexMap"841961"


athPLDEPSILON | Entrez gene ID : 841961      
Species ath bra bna ghi gma vvi ppo mtr sot nta hvu bdi sly osa tae zma cre sbi cit
Paralog 9 1 1 2 3 1 1 2 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00564 [list] [network] Glycerophospholipid metabolism (99 genes)
ath00565 [list] [network] Ether lipid metabolism (26 genes)
ath04144 [list] [network] Endocytosis (156 genes)
GO BP
GO:0045848 [list] [network] positive regulation of nitrogen utilization  (1 genes)  IMP  
GO:0009395 [list] [network] phospholipid catabolic process  (8 genes)  IDA TAS  
GO:0051365 [list] [network] cellular response to potassium ion starvation  (8 genes)  IMP  
GO:0006995 [list] [network] cellular response to nitrogen starvation  (28 genes)  IMP  
GO:0009825 [list] [network] multidimensional cell growth  (43 genes)  IMP  
GO:0016036 [list] [network] cellular response to phosphate starvation  (116 genes)  IMP  
GO:0051301 [list] [network] cell division  (192 genes)  IMP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO:0009791 [list] [network] post-embryonic development  (1579 genes)  IMP  
GO CC
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO MF
GO:0004630 [list] [network] phospholipase D activity  (12 genes)  IDA ISS  
Protein NP_001320457.1 [sequence] [blastp]
NP_175914.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  plas 1,  cysk_plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001320457.1)
cysk 7,  cyto 2  (predict for NP_175914.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001320457.1)
other 8  (predict for NP_175914.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PLDEPSILON
ath-r.7
for
PLDEPSILON
ath-m.9
for
PLDEPSILON
ath-e.2
for
PLDEPSILON
ath-m.4.bio
for
PLDEPSILON
ath-m.4.hor
for
PLDEPSILON
ath-m.4.lig
for
PLDEPSILON
ath-m.4.str
for
PLDEPSILON
ath-m.4.tis
for
PLDEPSILON
bra-r.6
for
103871055
bna-r.1
for
106345757
ghi-r.1
for
107950668
ghi-r.1
for
107951929
gma-u.5
for
100807431
gma-u.5
for
100812642
gma-u.5
for
100789235
vvi-u.5
for
100256679
ppo-u.5
for
18096739
mtr-u.5
for
25500438
mtr-u.5
for
11429900
sot-r.1
for
102591861
nta-r.1
for
107761687
nta-r.1
for
107792301


Ortholog ID: 12700
Species ath bra bna ghi ghi gma gma gma vvi ppo mtr mtr sot nta nta
Symbol PLDEPSILON LOC103871055 LOC106345757 LOC107950668 LOC107951929 LOC100807431 LOC100812642 LOC100789235 LOC100256679 LOC18096739 LOC25500438 LOC11429900 LOC102591861 LOC107761687 LOC107792301
Function* phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4 phospholipase D alpha 4-like phospholipase D alpha 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00564 Glycerophospholipid metabolism 2
bra00565 Ether lipid metabolism 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00460 Cyanoamino acid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma00565 Ether lipid metabolism 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00565 Ether lipid metabolism 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
mtr00565 Ether lipid metabolism 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841961 103871055 106345757 107950668 107951929 100807431 100812642 100789235 100256679 18096739 25500438 11429900 102591861 107761687 107792301
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