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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   NDF5   NDH-dependent cyclic electron flow 5 
 ath-r.7   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.9   NDF5   NDH-dependent cyclic electron flow 5 
 ath-e.2   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.4.bio   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.4.hor   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.4.lig   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.4.str   NDF5   NDH-dependent cyclic electron flow 5 
 ath-m.4.tis   NDF5   NDH-dependent cyclic electron flow 5 
 bra-r.6   103871039   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 bna-r.1   106345772   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 bna-r.1   111213158   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 ghi-r.1   107888424   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 ghi-r.1   107942845   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 cit-r.1   102617687   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 gma-u.5   100775728   uncharacterized LOC100775728 
 vvi-u.5   100267590   photosynthetic NDH subunit of subcomplex B 2, chloroplastic 
 ppo-u.5   7469878   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 mtr-u.5   11412540   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 sly-u.5   101263088   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 sot-r.1   102593667   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 nta-r.1   107814258   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 nta-r.1   107777780   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 osa-u.5   4334106   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 zma-u.5   103644004   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 tae-r.2   123113307   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 tae-r.2   123105015   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 tae-r.2   123122820   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 hvu-r.1   123452219   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 sbi-r.1   110429929   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 
 bdi-r.1   100821757   protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 

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Top 50 coexpressed genes to NDF5 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to NDF5 (ath-u.5 coexpression data)

CoexMap"841984"


athNDF5 | Entrez gene ID : 841984      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (16 genes)  IMP  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IMP  
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3740 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  IDA  
GO MF
GO:0030246 [list] [network] carbohydrate binding  (164 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (5718 genes)  IEA  
Protein NP_564687.1 [sequence] [blastp]
NP_849810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  mito 2  (predict for NP_564687.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_849810.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_564687.1)
chlo 7  (predict for NP_849810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
NDF5
ath-r.7
for
NDF5
ath-m.9
for
NDF5
ath-e.2
for
NDF5
ath-m.4.bio
for
NDF5
ath-m.4.hor
for
NDF5
ath-m.4.lig
for
NDF5
ath-m.4.str
for
NDF5
ath-m.4.tis
for
NDF5
bra-r.6
for
103871039
bna-r.1
for
106345772
bna-r.1
for
111213158
ghi-r.1
for
107888424
ghi-r.1
for
107942845
cit-r.1
for
102617687
gma-u.5
for
100775728
vvi-u.5
for
100267590
ppo-u.5
for
7469878
mtr-u.5
for
11412540
sly-u.5
for
101263088
sot-r.1
for
102593667
nta-r.1
for
107814258
nta-r.1
for
107777780
osa-u.5
for
4334106
zma-u.5
for
103644004
tae-r.2
for
123113307
tae-r.2
for
123105015
tae-r.2
for
123122820
hvu-r.1
for
123452219
sbi-r.1
for
110429929
bdi-r.1
for
100821757


Ortholog ID: 11504
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol NDF5 LOC103871039 LOC106345772 LOC111213158 LOC107888424 LOC107942845 LOC102617687 LOC100775728 LOC100267590 LOC7469878 LOC11412540 LOC101263088 LOC102593667 LOC107814258 LOC107777780 LOC4334106 LOC103644004 LOC123113307 LOC123105015 LOC123122820 LOC123452219 LOC110429929 LOC100821757
Function* NDH-dependent cyclic electron flow 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 uncharacterized LOC100775728 photosynthetic NDH subunit of subcomplex B 2, chloroplastic protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 protein NDH-DEPENDENT CYCLIC ELECTRON FLOW 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
sot00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 5
nta01200 Carbon metabolism 5
nta00030 Pentose phosphate pathway 4
nta00051 Fructose and mannose metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta00010 Glycolysis / Gluconeogenesis 6
nta00030 Pentose phosphate pathway 4
nta00051 Fructose and mannose metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00860 Porphyrin metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 3
bdi00260 Glycine, serine and threonine metabolism 2
bdi00630 Glyoxylate and dicarboxylate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841984 103871039 106345772 111213158 107888424 107942845 102617687 100775728 100267590 7469878 11412540 101263088 102593667 107814258 107777780 4334106 103644004 123113307 123105015 123122820 123452219 110429929 100821757
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