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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT1G57720   Translation elongation factor EF1B, gamma chain 
 ath-r.7   AT1G57720   Translation elongation factor EF1B, gamma chain 
 ath-e.2   AT1G57720   Translation elongation factor EF1B, gamma chain 
 ath-u.5   AT1G09640   Translation elongation factor EF1B, gamma chain 
 bra-r.6   103871738   probable elongation factor 1-gamma 1 
 bra-r.6   103836321   probable elongation factor 1-gamma 1 
 bra-r.6   103843341   probable elongation factor 1-gamma 1 
 bna-r.1   106453144   probable elongation factor 1-gamma 1 
 bna-r.1   106418372   probable elongation factor 1-gamma 1 
 bna-r.1   106401045   probable elongation factor 1-gamma 1 
 ghi-r.1   107945196   elongation factor 1-gamma 
 ghi-r.1   107945197   elongation factor 1-gamma 
 ghi-r.1   107928364   elongation factor 1-gamma 
 cit-r.1   102609380   elongation factor 1-gamma-like 
 cit-r.1   102621285   elongation factor 1-gamma-like 
 gma-u.5   EF1BGAMMA4   elongation factor 1-gamma 
 gma-u.5   EF1BGAMMA1   elongation factor 1-gamma-like 
 gma-u.5   EF1BGAMMA2   elongation factor 1-gamma-like 
 vvi-u.5   100264325   elongation factor 1-gamma 
 vvi-u.5   100246571   elongation factor 1-gamma 
 ppo-u.5   7475774   elongation factor 1-gamma 
 ppo-u.5   18111142   elongation factor 1-gamma 
 ppo-u.5   18098338   elongation factor 1-gamma 2 
 mtr-u.5   25494379   elongation factor 1-gamma 
 mtr-u.5   25489145   elongation factor 1-gamma 
 mtr-u.5   11419764   elongation factor 1-gamma 
 sly-u.5   101249702   elongation factor 1-gamma 2 
 sly-u.5   101248107   elongation factor 1-gamma 2 
 sot-r.1   102578147   elongation factor 1-gamma 2 
 sot-r.1   102580230   elongation factor 1-gamma 2-like 
 nta-r.1   107827359   elongation factor 1-gamma 3 
 nta-r.1   107788457   elongation factor 1-gamma 2 
 nta-r.1   107766924   elongation factor 1-gamma 2-like 
 osa-u.5   4341354   elongation factor 1-gamma 3-like 
 osa-u.5   4328752   elongation factor 1-gamma 2-like 
 osa-u.5   4328753   elongation factor 1-gamma 1-like 
 zma-u.5   100284862   elongation factor 1-gamma 2 
 zma-u.5   100381466   putative elongation factor 1-gamma 2 
 zma-u.5   100192872   Elongation factor gamma1 
 tae-r.2   123166928   elongation factor 1-gamma 2 
 tae-r.2   123160303   elongation factor 1-gamma 2 
 hvu-r.1   123411776   elongation factor 1-gamma 2-like 
 sbi-r.1   8085532   elongation factor 1-gamma 2 
 sbi-r.1   8079301   elongation factor 1-gamma 3 
 bdi-r.1   100841544   elongation factor 1-gamma 2 
 bdi-r.1   100832936   elongation factor 1-gamma 3 

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Top 50 coexpressed genes to AT1G57720 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G57720 (ath-u.5 coexpression data)

CoexMap"842147"


athAT1G57720 | Entrez gene ID : 842147      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 2 3 2 3 3 2 2 3 3 3 2 1 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010043 [list] [network] response to zinc ion  (51 genes)  IEP  
GO CC
GO:0010494 [list] [network] cytoplasmic stress granule  (143 genes)  IDA  
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA  
GO MF
GO:0004364 [list] [network] glutathione transferase activity  (24 genes)  IEA  
GO:0005507 [list] [network] copper ion binding  (134 genes)  HDA  
Protein NP_001031202.1 [sequence] [blastp]
NP_176084.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  pero 1  (predict for NP_001031202.1)
cyto 6,  chlo 2,  pero 1  (predict for NP_176084.1)
Subcellular
localization
TargetP
other 6  (predict for NP_001031202.1)
other 6  (predict for NP_176084.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT1G57720
ath-r.7
for
AT1G57720
ath-e.2
for
AT1G57720
ath-u.5
for
AT1G09640
bra-r.6
for
103871738
bra-r.6
for
103836321
bra-r.6
for
103843341
bna-r.1
for
106453144
bna-r.1
for
106418372
bna-r.1
for
106401045
ghi-r.1
for
107945196
ghi-r.1
for
107945197
ghi-r.1
for
107928364
cit-r.1
for
102609380
cit-r.1
for
102621285
gma-u.5
for
EF1BGAMMA4
gma-u.5
for
EF1BGAMMA1
gma-u.5
for
EF1BGAMMA2
vvi-u.5
for
100264325
vvi-u.5
for
100246571
ppo-u.5
for
7475774
ppo-u.5
for
18111142
ppo-u.5
for
18098338
mtr-u.5
for
25494379
mtr-u.5
for
25489145
mtr-u.5
for
11419764
sly-u.5
for
101249702
sly-u.5
for
101248107
sot-r.1
for
102578147
sot-r.1
for
102580230
nta-r.1
for
107827359
nta-r.1
for
107788457
nta-r.1
for
107766924
osa-u.5
for
4341354
osa-u.5
for
4328752
osa-u.5
for
4328753
zma-u.5
for
100284862
zma-u.5
for
100381466
zma-u.5
for
100192872
tae-r.2
for
123166928
tae-r.2
for
123160303
hvu-r.1
for
123411776
sbi-r.1
for
8085532
sbi-r.1
for
8079301
bdi-r.1
for
100841544
bdi-r.1
for
100832936


Ortholog ID: 3160
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu sbi sbi bdi bdi
Symbol AT1G57720 AT1G09640 LOC103871738 LOC103836321 LOC103843341 LOC106453144 LOC106401045 LOC106346260 LOC107945196 LOC107928364 LOC107928401 LOC102609380 LOC102621285 EF1BGAMMA4 EF1BGAMMA2 EF1BGAMMA3 LOC100264325 LOC100246571 LOC7475774 LOC18111142 LOC18098338 LOC25494379 LOC25489145 LOC11419764 LOC101249702 LOC101248107 LOC102578147 LOC102580230 LOC107827359 LOC107788457 LOC107766924 LOC4341354 LOC4328752 LOC4328753 LOC100381466 LOC100192872 LOC100282446 LOC123166928 LOC123148040 LOC123411776 LOC8085532 LOC8079301 LOC100841544 LOC100832936
Function* Translation elongation factor EF1B, gamma chain Translation elongation factor EF1B, gamma chain probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 probable elongation factor 1-gamma 1 elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma-like elongation factor 1-gamma-like elongation factor 1-gamma elongation factor 1-gamma-like EF1Bgamma class glutathione S-transferase elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma 2 elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma elongation factor 1-gamma 2 elongation factor 1-gamma 2 elongation factor 1-gamma 2 elongation factor 1-gamma 2-like elongation factor 1-gamma 3 elongation factor 1-gamma 2 elongation factor 1-gamma 2-like elongation factor 1-gamma 3-like elongation factor 1-gamma 2-like elongation factor 1-gamma 1-like putative elongation factor 1-gamma 2 Elongation factor gamma1 elongation factor 1-gamma 3 elongation factor 1-gamma 2 elongation factor 1-gamma 2 elongation factor 1-gamma 2-like elongation factor 1-gamma 2 elongation factor 1-gamma 3 elongation factor 1-gamma 2 elongation factor 1-gamma 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 12
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma01230 Biosynthesis of amino acids 3
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
gma00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot01230 Biosynthesis of amino acids 3
sot00010 Glycolysis / Gluconeogenesis 2
sot01200 Carbon metabolism 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
osa03060 Protein export 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 6
bdi00510 N-Glycan biosynthesis 3
bdi00513 Various types of N-glycan biosynthesis 3
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842147 837491 103871738 103836321 103843341 106453144 106401045 106346260 107945196 107928364 107928401 102609380 102621285 547637 100795680 100787125 100264325 100246571 7475774 18111142 18098338 25494379 25489145 11419764 101249702 101248107 102578147 102580230 107827359 107788457 107766924 4341354 4328752 4328753 100381466 100192872 100282446 123166928 123148040 123411776 8085532 8079301 100841544 100832936
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